MPI-AMRVAC
3.0
The MPI - Adaptive Mesh Refinement - Versatile Advection Code
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Magneto-hydrodynamics module. More...
Data Types | |
interface | fun_kin_en |
Functions/Subroutines | |
subroutine | mhd_write_info (fh) |
Write this module's parameters to a snapsoht. More... | |
subroutine | mhd_angmomfix (fC, x, wnew, ixIL, ixOL, idim) |
subroutine, public | mhd_phys_init () |
subroutine | mhd_te_images |
subroutine | mhd_sts_set_source_tc_mhd (ixIL, ixOL, w, x, wres, fix_conserve_at_step, my_dt, igrid, nflux) |
double precision function | mhd_get_tc_dt_mhd (w, ixIL, ixOL, dxD, x) |
subroutine | mhd_tc_handle_small_e (w, x, ixIL, ixOL, step) |
subroutine | tc_params_read_mhd (fl) |
subroutine | rc_params_read (fl) |
subroutine | set_equi_vars_grid_faces (igrid, x, ixIL, ixOL) |
sets the equilibrium variables More... | |
subroutine | set_equi_vars_grid (igrid) |
sets the equilibrium variables More... | |
double precision function, dimension(ixo^s, 1:nwc) | convert_vars_splitting (ixIL, ixOL, w, x, nwc) |
subroutine | mhd_check_params |
subroutine | mhd_physical_units () |
subroutine | mhd_check_w_semirelati (primitive, ixIL, ixOL, w, flag) |
subroutine | mhd_check_w_origin (primitive, ixIL, ixOL, w, flag) |
subroutine | mhd_check_w_hde (primitive, ixIL, ixOL, w, flag) |
subroutine | mhd_to_conserved_origin (ixIL, ixOL, w, x) |
Transform primitive variables into conservative ones. More... | |
subroutine | mhd_to_conserved_hde (ixIL, ixOL, w, x) |
Transform primitive variables into conservative ones. More... | |
subroutine | mhd_to_conserved_inte (ixIL, ixOL, w, x) |
Transform primitive variables into conservative ones. More... | |
subroutine | mhd_to_conserved_split_rho (ixIL, ixOL, w, x) |
Transform primitive variables into conservative ones. More... | |
subroutine | mhd_to_conserved_semirelati (ixIL, ixOL, w, x) |
Transform primitive variables into conservative ones. More... | |
subroutine | mhd_to_primitive_origin (ixIL, ixOL, w, x) |
Transform conservative variables into primitive ones. More... | |
subroutine | mhd_to_primitive_hde (ixIL, ixOL, w, x) |
Transform conservative variables into primitive ones. More... | |
subroutine | mhd_to_primitive_inte (ixIL, ixOL, w, x) |
Transform conservative variables into primitive ones. More... | |
subroutine | mhd_to_primitive_split_rho (ixIL, ixOL, w, x) |
Transform conservative variables into primitive ones. More... | |
subroutine | mhd_to_primitive_semirelati (ixIL, ixOL, w, x) |
Transform conservative variables into primitive ones. More... | |
subroutine, public | mhd_ei_to_e (ixIL, ixOL, w, x) |
Transform internal energy to total energy. More... | |
subroutine | mhd_ei_to_e_hde (ixIL, ixOL, w, x) |
Transform internal energy to hydrodynamic energy. More... | |
subroutine | mhd_ei_to_e_semirelati (ixIL, ixOL, w, x) |
Transform internal energy to total energy and velocity to momentum. More... | |
subroutine, public | mhd_e_to_ei (ixIL, ixOL, w, x) |
Transform total energy to internal energy. More... | |
subroutine | mhd_e_to_ei_hde (ixIL, ixOL, w, x) |
Transform hydrodynamic energy to internal energy. More... | |
subroutine | mhd_e_to_ei_semirelati (ixIL, ixOL, w, x) |
Transform total energy to internal energy and momentum to velocity. More... | |
subroutine | mhd_ei_to_e_aux (ixIL, ixOL, w, x) |
Update eaux and transform internal energy to total energy. More... | |
subroutine | mhd_e_to_ei_aux (ixIL, ixOL, w, x) |
Transform total energy to internal energy via eaux as internal energy. More... | |
subroutine | mhd_energy_synchro (ixIL, ixOL, w, x) |
subroutine | mhd_handle_small_values_semirelati (primitive, w, x, ixIL, ixOL, subname) |
subroutine | mhd_handle_small_values_origin (primitive, w, x, ixIL, ixOL, subname) |
subroutine | mhd_handle_small_values_hde (primitive, w, x, ixIL, ixOL, subname) |
subroutine | mhd_get_v_origin (w, x, ixIL, ixOL, v) |
Calculate v vector. More... | |
subroutine | mhd_get_v_boris (w, x, ixIL, ixOL, v) |
Calculate v vector. More... | |
subroutine, public | mhd_get_v_idim (w, x, ixIL, ixOL, idim, v) |
Calculate v component. More... | |
subroutine | mhd_get_cmax_origin (w, x, ixIL, ixOL, idim, cmax) |
Calculate cmax_idim=csound+abs(v_idim) within ixO^L. More... | |
subroutine | mhd_get_cmax_semirelati (w, x, ixIL, ixOL, idim, cmax) |
Calculate cmax_idim for semirelativistic MHD. More... | |
subroutine | mhd_get_a2max (w, x, ixIL, ixOL, a2max) |
subroutine | mhd_get_tcutoff (ixIL, ixOL, w, x, Tco_local, Tmax_local) |
get adaptive cutoff temperature for TRAC (Johnston 2019 ApJL, 873, L22) More... | |
subroutine | mhd_get_h_speed (wprim, x, ixIL, ixOL, idim, Hspeed) |
get H speed for H-correction to fix the carbuncle problem at grid-aligned shock front More... | |
subroutine | mhd_get_cbounds (wLC, wRC, wLp, wRp, x, ixIL, ixOL, idim, Hspeed, cmax, cmin) |
Estimating bounds for the minimum and maximum signal velocities without split. More... | |
subroutine | mhd_get_cbounds_semirelati (wLC, wRC, wLp, wRp, x, ixIL, ixOL, idim, Hspeed, cmax, cmin) |
Estimating bounds for the minimum and maximum signal velocities without split. More... | |
subroutine | mhd_get_cbounds_split_rho (wLC, wRC, wLp, wRp, x, ixIL, ixOL, idim, Hspeed, cmax, cmin) |
Estimating bounds for the minimum and maximum signal velocities with rho split. More... | |
subroutine | mhd_get_ct_velocity (vcts, wLp, wRp, ixIL, ixOL, idim, cmax, cmin) |
prepare velocities for ct methods More... | |
subroutine | mhd_get_csound (w, x, ixIL, ixOL, idim, csound) |
Calculate fast magnetosonic wave speed. More... | |
subroutine | mhd_get_csound_prim (w, x, ixIL, ixOL, idim, csound) |
Calculate fast magnetosonic wave speed. More... | |
subroutine | mhd_get_csound_semirelati (w, x, ixIL, ixOL, idim, csound, gamma2) |
Calculate cmax_idim for semirelativistic MHD. More... | |
subroutine | mhd_get_pthermal_origin (w, x, ixIL, ixOL, pth) |
Calculate thermal pressure=(gamma-1)*(e-0.5*m**2/rho-b**2/2) within ixO^L. More... | |
subroutine | mhd_get_pthermal_semirelati (w, x, ixIL, ixOL, pth) |
Calculate thermal pressure=(gamma-1)*(e-0.5*m**2/rho-b**2/2) within ixO^L. More... | |
subroutine | mhd_get_pthermal_hde (w, x, ixIL, ixOL, pth) |
Calculate thermal pressure=(gamma-1)*(e-0.5*m**2/rho-b**2/2) within ixO^L. More... | |
subroutine | mhd_get_temperature_from_eint (w, x, ixIL, ixOL, res) |
Calculate temperature=p/rho when in e_ the internal energy is stored. More... | |
subroutine | mhd_get_temperature_from_etot (w, x, ixIL, ixOL, res) |
Calculate temperature=p/rho when in e_ the total energy is stored this does not check the values of mhd_energy and mhd_internal_e, mhd_energy = .true. and mhd_internal_e = .false. also check small_values is avoided. More... | |
subroutine | mhd_get_temperature_from_hde (w, x, ixIL, ixOL, res) |
Calculate temperature from hydrodynamic energy. More... | |
subroutine | mhd_get_temperature_from_eint_with_equi (w, x, ixIL, ixOL, res) |
subroutine | mhd_get_temperature_equi (w, x, ixIL, ixOL, res) |
subroutine | mhd_get_rho_equi (w, x, ixIL, ixOL, res) |
subroutine | mhd_get_pe_equi (w, x, ixIL, ixOL, res) |
subroutine | mhd_get_temperature_from_etot_with_equi (w, x, ixIL, ixOL, res) |
subroutine, public | mhd_get_csound2 (w, x, ixIL, ixOL, csound2) |
Calculate the square of the thermal sound speed csound2 within ixO^L. csound2=gamma*p/rho. More... | |
subroutine | mhd_get_p_total (w, x, ixIL, ixOL, p) |
Calculate total pressure within ixO^L including magnetic pressure. More... | |
subroutine | mhd_get_flux (wC, w, x, ixIL, ixOL, idim, f) |
Calculate fluxes within ixO^L without any splitting. More... | |
subroutine | mhd_get_flux_hde (wC, w, x, ixIL, ixOL, idim, f) |
Calculate fluxes within ixO^L without any splitting. More... | |
subroutine | mhd_get_flux_split (wC, w, x, ixIL, ixOL, idim, f) |
Calculate fluxes within ixO^L with possible splitting. More... | |
subroutine | mhd_get_flux_semirelati (wC, w, x, ixIL, ixOL, idim, f) |
Calculate semirelativistic fluxes within ixO^L without any splitting. More... | |
subroutine | add_source_ambipolar_internal_energy (qdt, ixIL, ixOL, wCT, w, x, ie) |
Source terms J.E in internal energy. For the ambipolar term E = ambiCoef * JxBxB=ambiCoef * B^2(-J_perpB) More... | |
subroutine | mhd_get_jxbxb (w, x, ixIL, ixOL, res) |
subroutine | sts_set_source_ambipolar (ixIL, ixOL, w, x, wres, fix_conserve_at_step, my_dt, igrid, nflux) |
Sets the sources for the ambipolar this is used for the STS method. More... | |
subroutine | update_faces_ambipolar (ixIL, ixOL, w, x, ECC, fE, circ) |
get ambipolar electric field and the integrals around cell faces More... | |
subroutine | get_flux_on_cell_face (ixIL, ixOL, ff, src) |
use cell-center flux to get cell-face flux and get the source term as the divergence of the flux More... | |
double precision function | get_ambipolar_dt (w, ixIL, ixOL, dxD, x) |
Calculates the explicit dt for the ambipokar term This function is used by both explicit scheme and STS method. More... | |
subroutine, public | multiplyambicoef (ixIL, ixOL, res, w, x) |
multiply res by the ambipolar coefficient The ambipolar coefficient is calculated as -mhd_eta_ambi/rho^2 The user may mask its value in the user file by implemneting usr_mask_ambipolar subroutine More... | |
subroutine | mhd_add_source (qdt, ixIL, ixOL, wCT, w, x, qsourcesplit, active, wCTprim) |
w[iws]=w[iws]+qdt*S[iws,wCT] where S is the source based on wCT within ixO More... | |
subroutine | add_pe0_divv (qdt, ixIL, ixOL, wCT, w, x) |
subroutine | get_lorentz_force (ixIL, ixOL, w, JxB) |
Compute the Lorentz force (JxB) More... | |
subroutine | mhd_gamma2_alfven (ixIL, ixOL, w, gamma_A2) |
Compute 1/(1+v_A^2/c^2) for semirelativistic MHD, where v_A is the Alfven velocity. More... | |
double precision function, dimension(ixo^s) | mhd_gamma_alfven (w, ixIL, ixOL) |
Compute 1/sqrt(1+v_A^2/c^2) for semirelativisitic MHD, where v_A is the Alfven velocity. More... | |
subroutine | internal_energy_add_source (qdt, ixIL, ixOL, wCT, w, x, ie) |
subroutine, public | mhd_get_rho (w, x, ixIL, ixOL, rho) |
subroutine | mhd_handle_small_ei (w, x, ixIL, ixOL, ie, subname) |
handle small or negative internal energy More... | |
subroutine | add_source_b0split (qdt, ixIL, ixOL, wCT, w, x) |
Source terms after split off time-independent magnetic field. More... | |
subroutine | add_source_semirelativistic (qdt, ixIL, ixOL, wCT, w, x, wCTprim) |
Source terms for semirelativistic MHD. More... | |
subroutine | add_source_hydrodynamic_e (qdt, ixIL, ixOL, wCT, w, x, wCTprim) |
Source terms for hydrodynamic energy version of MHD. More... | |
subroutine | add_source_res1 (qdt, ixIL, ixOL, wCT, w, x) |
Add resistive source to w within ixO Uses 3 point stencil (1 neighbour) in each direction, non-conservative. If the fourthorder precompiler flag is set, uses fourth order central difference for the laplacian. Then the stencil is 5 (2 neighbours). More... | |
subroutine | add_source_res2 (qdt, ixIL, ixOL, wCT, w, x) |
Add resistive source to w within ixO Uses 5 point stencil (2 neighbours) in each direction, conservative. More... | |
subroutine | add_source_hyperres (qdt, ixIL, ixOL, wCT, w, x) |
Add Hyper-resistive source to w within ixO Uses 9 point stencil (4 neighbours) in each direction. More... | |
subroutine | add_source_glm (qdt, ixIL, ixOL, wCT, w, x) |
subroutine | add_source_powel (qdt, ixIL, ixOL, wCT, w, x) |
Add divB related sources to w within ixO corresponding to Powel. More... | |
subroutine | add_source_janhunen (qdt, ixIL, ixOL, wCT, w, x) |
subroutine | add_source_linde (qdt, ixIL, ixOL, wCT, w, x) |
subroutine, public | get_divb (w, ixIL, ixOL, divb, fourthorder) |
Calculate div B within ixO. More... | |
subroutine, public | get_normalized_divb (w, ixIL, ixOL, divb) |
get dimensionless div B = |divB| * volume / area / |B| More... | |
subroutine, public | get_current (w, ixIL, ixOL, idirmin, current) |
Calculate idirmin and the idirmin:3 components of the common current array make sure that dxlevel(^D) is set correctly. More... | |
subroutine | mhd_get_dt (w, ixIL, ixOL, dtnew, dxD, x) |
If resistivity is not zero, check diffusion time limit for dt. More... | |
subroutine | mhd_add_source_geom (qdt, ixIL, ixOL, wCT, w, x) |
subroutine | mhd_add_source_geom_split (qdt, ixIL, ixOL, wCT, w, x) |
double precision function, dimension(ixo^s), public | mhd_mag_en_all (w, ixIL, ixOL) |
Compute 2 times total magnetic energy. More... | |
double precision function, dimension(ixo^s) | mhd_mag_i_all (w, ixIL, ixOL, idir) |
Compute full magnetic field by direction. More... | |
double precision function, dimension(ixo^s) | mhd_mag_en (w, ixIL, ixOL) |
Compute evolving magnetic energy. More... | |
double precision function, dimension(ixo^s) | mhd_kin_en_origin (w, ixIL, ixOL, inv_rho) |
compute kinetic energy More... | |
double precision function, dimension(ixo^s) | mhd_kin_en_boris (w, ixIL, ixOL, inv_rho) |
compute kinetic energy More... | |
subroutine | mhd_getv_hall (w, x, ixIL, ixOL, vHall) |
subroutine | mhd_get_jambi (w, x, ixIL, ixOL, res) |
subroutine | mhd_modify_wlr (ixIL, ixOL, qt, wLC, wRC, wLp, wRp, s, idir) |
subroutine | mhd_boundary_adjust (igrid, psb) |
subroutine | fixdivb_boundary (ixGL, ixOL, w, x, iB) |
subroutine, public | mhd_clean_divb_multigrid (qdt, qt, active) |
subroutine | mhd_update_faces (ixIL, ixOL, qt, qdt, wprim, fC, fE, sCT, s, vcts) |
subroutine | update_faces_average (ixIL, ixOL, qt, qdt, fC, fE, sCT, s) |
get electric field though averaging neighors to update faces in CT More... | |
subroutine | update_faces_contact (ixIL, ixOL, qt, qdt, wp, fC, fE, sCT, s, vcts) |
update faces using UCT contact mode by Gardiner and Stone 2005 JCP 205, 509 More... | |
subroutine | update_faces_hll (ixIL, ixOL, qt, qdt, fE, sCT, s, vcts) |
update faces More... | |
subroutine | get_resistive_electric_field (ixIL, ixOL, sCT, s, jce) |
calculate eta J at cell edges More... | |
subroutine | get_ambipolar_electric_field (ixIL, ixOL, w, x, fE) |
get ambipolar electric field on cell edges More... | |
subroutine, public | mhd_face_to_center (ixOL, s) |
calculate cell-center values from face-center values More... | |
subroutine, public | b_from_vector_potential (ixIsL, ixIL, ixOL, ws, x) |
calculate magnetic field from vector potential More... | |
Variables | |
logical, public, protected | mhd_energy = .true. |
Whether an energy equation is used. More... | |
logical, public, protected | mhd_thermal_conduction = .false. |
Whether thermal conduction is used. More... | |
type(tc_fluid), allocatable, public | tc_fl |
type of fluid for thermal conduction More... | |
type(te_fluid), allocatable, public | te_fl_mhd |
logical, public, protected | mhd_radiative_cooling = .false. |
Whether radiative cooling is added. More... | |
type(rc_fluid), allocatable, public | rc_fl |
type of fluid for radiative cooling More... | |
logical, public, protected | mhd_viscosity = .false. |
Whether viscosity is added. More... | |
logical, public, protected | mhd_gravity = .false. |
Whether gravity is added. More... | |
logical, public, protected | mhd_hall = .false. |
Whether Hall-MHD is used. More... | |
logical, public, protected | mhd_ambipolar = .false. |
Whether Ambipolar term is used. More... | |
logical, public, protected | mhd_ambipolar_sts = .false. |
Whether Ambipolar term is implemented using supertimestepping. More... | |
logical, public, protected | mhd_ambipolar_exp = .false. |
Whether Ambipolar term is implemented explicitly. More... | |
logical, public, protected | mhd_particles = .false. |
Whether particles module is added. More... | |
logical, public, protected | mhd_magnetofriction = .false. |
Whether magnetofriction is added. More... | |
logical, public, protected | mhd_glm = .false. |
Whether GLM-MHD is used to control div B. More... | |
logical, public, protected | mhd_glm_extended = .true. |
Whether extended GLM-MHD is used with additional sources. More... | |
logical, public, protected | mhd_trac = .false. |
Whether TRAC method is used. More... | |
integer, public, protected | mhd_trac_type =1 |
Which TRAC method is used. More... | |
double precision, public, protected | mhd_trac_mask = 0.d0 |
Height of the mask used in the TRAC method. More... | |
integer, public, protected | mhd_trac_finegrid =4 |
Distance between two adjacent traced magnetic field lines (in finest cell size) More... | |
logical, public, protected | mhd_solve_eaux = .false. |
Whether auxiliary internal energy is solved. More... | |
logical, public, protected | mhd_internal_e = .false. |
Whether internal energy is solved instead of total energy. More... | |
logical, public, protected | mhd_hydrodynamic_e = .false. |
Whether hydrodynamic energy is solved instead of total energy. More... | |
logical, public, protected | source_split_divb = .false. |
Whether divB cleaning sources are added splitting from fluid solver. More... | |
double precision, public | mhd_glm_alpha = 0.5d0 |
GLM-MHD parameter: ratio of the diffusive and advective time scales for div b taking values within [0, 1]. More... | |
logical, public, protected | mhd_semirelativistic = .false. |
Whether semirelativistic MHD equations (Gombosi 2002 JCP) are solved. More... | |
logical, public, protected | mhd_boris_simplification = .false. |
Whether boris simplified semirelativistic MHD equations (Gombosi 2002 JCP) are solved. More... | |
double precision, public, protected | mhd_reduced_c = const_c |
Reduced speed of light for semirelativistic MHD. More... | |
logical, public, protected | mhd_cak_force = .false. |
Whether CAK radiation line force is activated. More... | |
logical, public, protected | mhd_4th_order = .false. |
MHD fourth order. More... | |
logical, public | has_equi_rho0 = .false. |
whether split off equilibrium density More... | |
logical, public | has_equi_pe0 = .false. |
whether split off equilibrium thermal pressure More... | |
logical, public | mhd_equi_thermal = .false. |
integer, public | equi_rho0_ = -1 |
equi vars indices in the stateequi_vars array More... | |
integer, public | equi_pe0_ = -1 |
logical, public, protected | mhd_dump_full_vars = .false. |
whether dump full variables (when splitting is used) in a separate dat file More... | |
integer, public, protected | mhd_n_tracer = 0 |
Number of tracer species. More... | |
integer, public, protected | rho_ |
Index of the density (in the w array) More... | |
integer, dimension(:), allocatable, public, protected | mom |
Indices of the momentum density. More... | |
integer, public, protected | e_ |
Index of the energy density (-1 if not present) More... | |
integer, public, protected | p_ |
Index of the gas pressure (-1 if not present) should equal e_. More... | |
integer, dimension(:), allocatable, public, protected | mag |
Indices of the magnetic field. More... | |
integer, public, protected | psi_ |
Indices of the GLM psi. More... | |
integer, public, protected | eaux_ |
Indices of auxiliary internal energy. More... | |
integer, public, protected | paux_ |
integer, public, protected | tcoff_ |
Index of the cutoff temperature for the TRAC method. More... | |
integer, public, protected | tweight_ |
integer, dimension(:), allocatable, public, protected | tracer |
Indices of the tracers. More... | |
double precision, public | mhd_gamma = 5.d0/3.0d0 |
The adiabatic index. More... | |
double precision, public | mhd_adiab = 1.0d0 |
The adiabatic constant. More... | |
double precision, public | mhd_eta = 0.0d0 |
The MHD resistivity. More... | |
double precision, public | mhd_eta_hyper = 0.0d0 |
The MHD hyper-resistivity. More... | |
double precision, public | mhd_etah = 0.0d0 |
TODO: what is this? More... | |
double precision, public | mhd_eta_ambi = 0.0d0 |
The MHD ambipolar coefficient. More... | |
character(len=std_len), public, protected | typedivbfix = 'linde' |
Method type to clean divergence of B. More... | |
character(len=std_len), public, protected | type_ct = 'uct_contact' |
Method type of constrained transport. More... | |
logical, public, protected | mhd_divb_4thorder = .false. |
Whether divB is computed with a fourth order approximation. More... | |
logical, public | divbwave = .true. |
Add divB wave in Roe solver. More... | |
logical, public | clean_initial_divb = .false. |
clean initial divB More... | |
double precision, public, protected | he_abundance =0.1d0 |
Helium abundance over Hydrogen. More... | |
double precision, public, protected | h_ion_fr =1d0 |
Ionization fraction of H H_ion_fr = H+/(H+ + H) More... | |
double precision, public, protected | he_ion_fr =1d0 |
Ionization fraction of He He_ion_fr = (He2+ + He+)/(He2+ + He+ + He) More... | |
double precision, public, protected | he_ion_fr2 =1d0 |
Ratio of number He2+ / number He+ + He2+ He_ion_fr2 = He2+/(He2+ + He+) More... | |
double precision, public, protected | rr =1d0 |
logical, public, protected | eq_state_units = .true. |
logical, dimension(2 *^nd), public, protected | boundary_divbfix =.true. |
To control divB=0 fix for boundary. More... | |
integer, dimension(2 *^nd), public, protected | boundary_divbfix_skip =0 |
To skip * layer of ghost cells during divB=0 fix for boundary. More... | |
logical, public, protected | b0field_forcefree =.true. |
B0 field is force-free. More... | |
procedure(mask_subroutine), pointer, public | usr_mask_ambipolar => null() |
procedure(sub_get_pthermal), pointer, public | usr_rfactor => null() |
procedure(sub_convert), pointer, public | mhd_to_primitive => null() |
procedure(sub_convert), pointer, public | mhd_to_conserved => null() |
procedure(sub_get_pthermal), pointer, public | mhd_get_pthermal => null() |
procedure(sub_get_v), pointer, public | mhd_get_v => null() |
procedure(fun_kin_en), pointer, public | mhd_kin_en => null() |
Magneto-hydrodynamics module.
subroutine mod_mhd_phys::add_pe0_divv | ( | double precision, intent(in) | qdt, |
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s,1:nw), intent(in) | wCT, | ||
double precision, dimension(ixi^s,1:nw), intent(inout) | w, | ||
double precision, dimension(ixi^s,1:ndim), intent(in) | x | ||
) |
subroutine mod_mhd_phys::add_source_ambipolar_internal_energy | ( | double precision, intent(in) | qdt, |
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s,1:nw), intent(in) | wCT, | ||
double precision, dimension(ixi^s,1:nw), intent(inout) | w, | ||
double precision, dimension(ixi^s,1:ndim), intent(in) | x, | ||
integer, intent(in) | ie | ||
) |
Source terms J.E in internal energy. For the ambipolar term E = ambiCoef * JxBxB=ambiCoef * B^2(-J_perpB)
ambiCoef is calculated as mhd_ambi_coef/rho^2, see also the subroutine mhd_get_Jambi
Definition at line 3786 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::add_source_b0split | ( | double precision, intent(in) | qdt, |
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s,1:nw), intent(in) | wCT, | ||
double precision, dimension(ixi^s,1:nw), intent(inout) | w, | ||
double precision, dimension(ixi^s,1:ndim), intent(in) | x | ||
) |
Source terms after split off time-independent magnetic field.
Definition at line 4439 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::add_source_glm | ( | double precision, intent(in) | qdt, |
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s,1:nw), intent(in) | wCT, | ||
double precision, dimension(ixi^s,1:nw), intent(inout) | w, | ||
double precision, dimension(ixi^s,1:ndim), intent(in) | x | ||
) |
subroutine mod_mhd_phys::add_source_hydrodynamic_e | ( | double precision, intent(in) | qdt, |
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s,1:nw), intent(in) | wCT, | ||
double precision, dimension(ixi^s,1:nw), intent(inout) | w, | ||
double precision, dimension(ixi^s,1:ndim), intent(in) | x, | ||
double precision, dimension(ixi^s,1:nw), intent(in), optional | wCTprim | ||
) |
Source terms for hydrodynamic energy version of MHD.
Definition at line 4528 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::add_source_hyperres | ( | double precision, intent(in) | qdt, |
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s,1:nw), intent(in) | wCT, | ||
double precision, dimension(ixi^s,1:nw), intent(inout) | w, | ||
double precision, dimension(ixi^s,1:ndim), intent(in) | x | ||
) |
Add Hyper-resistive source to w within ixO Uses 9 point stencil (4 neighbours) in each direction.
Definition at line 4821 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::add_source_janhunen | ( | double precision, intent(in) | qdt, |
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s,1:nw), intent(in) | wCT, | ||
double precision, dimension(ixi^s,1:nw), intent(inout) | w, | ||
double precision, dimension(ixi^s,1:ndim), intent(in) | x | ||
) |
subroutine mod_mhd_phys::add_source_linde | ( | double precision, intent(in) | qdt, |
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s,1:nw), intent(in) | wCT, | ||
double precision, dimension(ixi^s,1:nw), intent(inout) | w, | ||
double precision, dimension(ixi^s,1:ndim), intent(in) | x | ||
) |
subroutine mod_mhd_phys::add_source_powel | ( | double precision, intent(in) | qdt, |
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s,1:nw), intent(in) | wCT, | ||
double precision, dimension(ixi^s,1:nw), intent(inout) | w, | ||
double precision, dimension(ixi^s,1:ndim), intent(in) | x | ||
) |
Add divB related sources to w within ixO corresponding to Powel.
Definition at line 4934 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::add_source_res1 | ( | double precision, intent(in) | qdt, |
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s,1:nw), intent(in) | wCT, | ||
double precision, dimension(ixi^s,1:nw), intent(inout) | w, | ||
double precision, dimension(ixi^s,1:ndim), intent(in) | x | ||
) |
Add resistive source to w within ixO Uses 3 point stencil (1 neighbour) in each direction, non-conservative. If the fourthorder precompiler flag is set, uses fourth order central difference for the laplacian. Then the stencil is 5 (2 neighbours).
Definition at line 4634 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::add_source_res2 | ( | double precision, intent(in) | qdt, |
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s,1:nw), intent(in) | wCT, | ||
double precision, dimension(ixi^s,1:nw), intent(inout) | w, | ||
double precision, dimension(ixi^s,1:ndim), intent(in) | x | ||
) |
Add resistive source to w within ixO Uses 5 point stencil (2 neighbours) in each direction, conservative.
Definition at line 4747 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::add_source_semirelativistic | ( | double precision, intent(in) | qdt, |
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s,1:nw), intent(in) | wCT, | ||
double precision, dimension(ixi^s,1:nw), intent(inout) | w, | ||
double precision, dimension(ixi^s,1:ndim), intent(in) | x, | ||
double precision, dimension(ixi^s,1:nw), intent(in), optional | wCTprim | ||
) |
Source terms for semirelativistic MHD.
Definition at line 4497 of file mod_mhd_phys.t.
subroutine, public mod_mhd_phys::b_from_vector_potential | ( | integer, intent(in) | ixIs, |
integer, intent(in) | L, | ||
integer, intent(in) | ixI, | ||
L, | |||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixis^s,1:nws), intent(inout) | ws, | ||
double precision, dimension(ixi^s,1:ndim), intent(in) | x | ||
) |
calculate magnetic field from vector potential
Definition at line 6871 of file mod_mhd_phys.t.
double precision function, dimension(ixo^s, 1:nwc) mod_mhd_phys::convert_vars_splitting | ( | integer, intent(in) | ixI, |
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s, 1:nw), intent(in) | w, | ||
double precision, dimension(ixi^s,1:ndim), intent(in) | x, | ||
integer, intent(in) | nwc | ||
) |
subroutine mod_mhd_phys::fixdivb_boundary | ( | integer, intent(in) | ixG, |
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixg^s,1:nw), intent(inout) | w, | ||
double precision, dimension(ixg^s,1:ndim), intent(in) | x, | ||
integer, intent(in) | iB | ||
) |
double precision function mod_mhd_phys::get_ambipolar_dt | ( | double precision, dimension(ixi^s,1:nw), intent(in) | w, |
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, intent(in) | dx, | ||
double precision, intent(in) | D, | ||
double precision, dimension(ixi^s,1:ndim), intent(in) | x | ||
) |
Calculates the explicit dt for the ambipokar term This function is used by both explicit scheme and STS method.
Definition at line 4057 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::get_ambipolar_electric_field | ( | integer, intent(in) | ixI, |
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s,1:nw), intent(in) | w, | ||
double precision, dimension(ixi^s,1:ndim), intent(in) | x, | ||
double precision, dimension(ixi^s,7-2*ndim:3), intent(out) | fE | ||
) |
get ambipolar electric field on cell edges
Definition at line 6778 of file mod_mhd_phys.t.
subroutine, public mod_mhd_phys::get_current | ( | double precision, dimension(ixi^s,1:nw), intent(in) | w, |
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
integer, intent(out) | idirmin, | ||
double precision, dimension(ixi^s,7-2*ndir:3) | current | ||
) |
Calculate idirmin and the idirmin:3 components of the common current array make sure that dxlevel(^D) is set correctly.
Definition at line 5133 of file mod_mhd_phys.t.
subroutine, public mod_mhd_phys::get_divb | ( | double precision, dimension(ixi^s,1:nw), intent(in) | w, |
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s), intent(inout) | divb, | ||
logical, intent(in), optional | fourthorder | ||
) |
Calculate div B within ixO.
Definition at line 5068 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::get_flux_on_cell_face | ( | integer, intent(in) | ixI, |
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(:^d&,:), intent(inout) | ff, | ||
double precision, dimension(ixi^s), intent(out) | src | ||
) |
use cell-center flux to get cell-face flux and get the source term as the divergence of the flux
Definition at line 4002 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::get_lorentz_force | ( | integer, intent(in) | ixI, |
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s,1:nw), intent(in) | w, | ||
double precision, dimension(ixi^s,3), intent(inout) | JxB | ||
) |
Compute the Lorentz force (JxB)
Definition at line 4293 of file mod_mhd_phys.t.
subroutine, public mod_mhd_phys::get_normalized_divb | ( | double precision, dimension(ixi^s,1:nw), intent(in) | w, |
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s) | divb | ||
) |
get dimensionless div B = |divB| * volume / area / |B|
Definition at line 5099 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::get_resistive_electric_field | ( | integer, intent(in) | ixI, |
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
type(state), intent(in) | sCT, | ||
type(state), intent(in) | s, | ||
double precision, dimension(ixi^s,7-2*ndim:3) | jce | ||
) |
calculate eta J at cell edges
Definition at line 6709 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::internal_energy_add_source | ( | double precision, intent(in) | qdt, |
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s,1:nw), intent(in) | wCT, | ||
double precision, dimension(ixi^s,1:nw), intent(inout) | w, | ||
double precision, dimension(ixi^s,1:ndim), intent(in) | x, | ||
integer, intent(in) | ie | ||
) |
subroutine mod_mhd_phys::mhd_add_source | ( | double precision, intent(in) | qdt, |
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s,1:nw), intent(in) | wCT, | ||
double precision, dimension(ixi^s,1:nw), intent(inout) | w, | ||
double precision, dimension(ixi^s,1:ndim), intent(in) | x, | ||
logical, intent(in) | qsourcesplit, | ||
logical, intent(inout) | active, | ||
double precision, dimension(ixi^s,1:nw), intent(in), optional | wCTprim | ||
) |
w[iws]=w[iws]+qdt*S[iws,wCT] where S is the source based on wCT within ixO
Definition at line 4109 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::mhd_add_source_geom | ( | double precision, intent(in) | qdt, |
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s,1:nw), intent(inout) | wCT, | ||
double precision, dimension(ixi^s,1:nw), intent(inout) | w, | ||
double precision, dimension(ixi^s,1:ndim), intent(in) | x | ||
) |
subroutine mod_mhd_phys::mhd_add_source_geom_split | ( | double precision, intent(in) | qdt, |
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s,1:nw), intent(inout) | wCT, | ||
double precision, dimension(ixi^s,1:nw), intent(inout) | w, | ||
double precision, dimension(ixi^s,1:ndim), intent(in) | x | ||
) |
subroutine mod_mhd_phys::mhd_angmomfix | ( | double precision, dimension(ixi^s,1:nwflux,1:ndim), intent(inout) | fC, |
double precision, dimension(ixi^s,1:ndim), intent(in) | x, | ||
double precision, dimension(ixi^s,1:nw), intent(inout) | wnew, | ||
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
integer, intent(in) | idim | ||
) |
subroutine mod_mhd_phys::mhd_boundary_adjust | ( | integer, intent(in) | igrid, |
type(state), dimension(max_blocks), target | psb | ||
) |
subroutine mod_mhd_phys::mhd_check_params |
subroutine mod_mhd_phys::mhd_check_w_hde | ( | logical, intent(in) | primitive, |
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s,nw), intent(in) | w, | ||
logical, dimension(ixi^s,1:nw), intent(inout) | flag | ||
) |
Definition at line 1351 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::mhd_check_w_origin | ( | logical, intent(in) | primitive, |
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s,nw), intent(in) | w, | ||
logical, dimension(ixi^s,1:nw), intent(inout) | flag | ||
) |
subroutine mod_mhd_phys::mhd_check_w_semirelati | ( | logical, intent(in) | primitive, |
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s,nw), intent(in) | w, | ||
logical, dimension(ixi^s,1:nw), intent(inout) | flag | ||
) |
Definition at line 1243 of file mod_mhd_phys.t.
subroutine, public mod_mhd_phys::mhd_clean_divb_multigrid | ( | double precision, intent(in) | qdt, |
double precision, intent(in) | qt, | ||
logical, intent(inout) | active | ||
) |
[in] | qdt | Current time step |
[in] | qt | Current time |
[in,out] | active | Output if the source is active |
Definition at line 6103 of file mod_mhd_phys.t.
subroutine, public mod_mhd_phys::mhd_e_to_ei | ( | integer, intent(in) | ixI, |
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s, nw), intent(inout) | w, | ||
double precision, dimension(ixi^s, 1:ndim), intent(in) | x | ||
) |
Transform total energy to internal energy.
Definition at line 1813 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::mhd_e_to_ei_aux | ( | integer, intent(in) | ixI, |
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s, nw), intent(inout) | w, | ||
double precision, dimension(ixi^s, 1:ndim), intent(in) | x | ||
) |
Transform total energy to internal energy via eaux as internal energy.
Definition at line 1874 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::mhd_e_to_ei_hde | ( | integer, intent(in) | ixI, |
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s, nw), intent(inout) | w, | ||
double precision, dimension(ixi^s, 1:ndim), intent(in) | x | ||
) |
Transform hydrodynamic energy to internal energy.
Definition at line 1831 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::mhd_e_to_ei_semirelati | ( | integer, intent(in) | ixI, |
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s, nw), intent(inout) | w, | ||
double precision, dimension(ixi^s, 1:ndim), intent(in) | x | ||
) |
Transform total energy to internal energy and momentum to velocity.
Definition at line 1847 of file mod_mhd_phys.t.
subroutine, public mod_mhd_phys::mhd_ei_to_e | ( | integer, intent(in) | ixI, |
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s, nw), intent(inout) | w, | ||
double precision, dimension(ixi^s, 1:ndim), intent(in) | x | ||
) |
Transform internal energy to total energy.
Definition at line 1775 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::mhd_ei_to_e_aux | ( | integer, intent(in) | ixI, |
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s, nw), intent(inout) | w, | ||
double precision, dimension(ixi^s, 1:ndim), intent(in) | x | ||
) |
Update eaux and transform internal energy to total energy.
Definition at line 1859 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::mhd_ei_to_e_hde | ( | integer, intent(in) | ixI, |
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s, nw), intent(inout) | w, | ||
double precision, dimension(ixi^s, 1:ndim), intent(in) | x | ||
) |
Transform internal energy to hydrodynamic energy.
Definition at line 1789 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::mhd_ei_to_e_semirelati | ( | integer, intent(in) | ixI, |
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s, nw), intent(inout) | w, | ||
double precision, dimension(ixi^s, 1:ndim), intent(in) | x | ||
) |
Transform internal energy to total energy and velocity to momentum.
Definition at line 1801 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::mhd_energy_synchro | ( | integer, intent(in) | ixI, |
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s,1:nw), intent(inout) | w, | ||
double precision, dimension(ixi^s,1:ndim), intent(in) | x | ||
) |
subroutine, public mod_mhd_phys::mhd_face_to_center | ( | integer, intent(in) | ixO, |
integer, intent(in) | L, | ||
type(state) | s | ||
) |
calculate cell-center values from face-center values
Definition at line 6811 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::mhd_gamma2_alfven | ( | integer, intent(in) | ixI, |
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s, nw), intent(in) | w, | ||
double precision, dimension(ixo^s), intent(out) | gamma_A2 | ||
) |
Compute 1/(1+v_A^2/c^2) for semirelativistic MHD, where v_A is the Alfven velocity.
Definition at line 4321 of file mod_mhd_phys.t.
double precision function, dimension(ixo^s) mod_mhd_phys::mhd_gamma_alfven | ( | double precision, dimension(ixi^s, nw), intent(in) | w, |
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L | |||
) |
Compute 1/sqrt(1+v_A^2/c^2) for semirelativisitic MHD, where v_A is the Alfven velocity.
Definition at line 4340 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::mhd_get_a2max | ( | double precision, dimension(ixi^s, nw), intent(in) | w, |
double precision, dimension(ixi^s,1:ndim), intent(in) | x, | ||
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ndim), intent(inout) | a2max | ||
) |
4th order
Definition at line 2347 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::mhd_get_cbounds | ( | double precision, dimension(ixi^s, nw), intent(in) | wLC, |
double precision, dimension(ixi^s, nw), intent(in) | wRC, | ||
double precision, dimension(ixi^s, nw), intent(in) | wLp, | ||
double precision, dimension(ixi^s, nw), intent(in) | wRp, | ||
double precision, dimension(ixi^s,1:ndim), intent(in) | x, | ||
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
integer, intent(in) | idim, | ||
double precision, dimension(ixi^s,1:number_species), intent(in) | Hspeed, | ||
double precision, dimension(ixi^s,1:number_species), intent(inout) | cmax, | ||
double precision, dimension(ixi^s,1:number_species), intent(inout), optional | cmin | ||
) |
Estimating bounds for the minimum and maximum signal velocities without split.
Definition at line 2590 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::mhd_get_cbounds_semirelati | ( | double precision, dimension(ixi^s, nw), intent(in) | wLC, |
double precision, dimension(ixi^s, nw), intent(in) | wRC, | ||
double precision, dimension(ixi^s, nw), intent(in) | wLp, | ||
double precision, dimension(ixi^s, nw), intent(in) | wRp, | ||
double precision, dimension(ixi^s,1:ndim), intent(in) | x, | ||
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
integer, intent(in) | idim, | ||
double precision, dimension(ixi^s,1:number_species), intent(in) | Hspeed, | ||
double precision, dimension(ixi^s,1:number_species), intent(inout) | cmax, | ||
double precision, dimension(ixi^s,1:number_species), intent(inout), optional | cmin | ||
) |
Estimating bounds for the minimum and maximum signal velocities without split.
Definition at line 2669 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::mhd_get_cbounds_split_rho | ( | double precision, dimension(ixi^s, nw), intent(in) | wLC, |
double precision, dimension(ixi^s, nw), intent(in) | wRC, | ||
double precision, dimension(ixi^s, nw), intent(in) | wLp, | ||
double precision, dimension(ixi^s, nw), intent(in) | wRp, | ||
double precision, dimension(ixi^s,1:ndim), intent(in) | x, | ||
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
integer, intent(in) | idim, | ||
double precision, dimension(ixi^s,1:number_species), intent(in) | Hspeed, | ||
double precision, dimension(ixi^s,1:number_species), intent(inout) | cmax, | ||
double precision, dimension(ixi^s,1:number_species), intent(inout), optional | cmin | ||
) |
Estimating bounds for the minimum and maximum signal velocities with rho split.
Definition at line 2696 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::mhd_get_cmax_origin | ( | double precision, dimension(ixi^s, nw), intent(in) | w, |
double precision, dimension(ixi^s,1:ndim), intent(in) | x, | ||
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
integer, intent(in) | idim, | ||
double precision, dimension(ixi^s), intent(inout) | cmax | ||
) |
Calculate cmax_idim=csound+abs(v_idim) within ixO^L.
Definition at line 2281 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::mhd_get_cmax_semirelati | ( | double precision, dimension(ixi^s, nw), intent(in) | w, |
double precision, dimension(ixi^s,1:ndim), intent(in) | x, | ||
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
integer, intent(in) | idim, | ||
double precision, dimension(ixi^s), intent(inout) | cmax | ||
) |
Calculate cmax_idim for semirelativistic MHD.
Definition at line 2297 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::mhd_get_csound | ( | double precision, dimension(ixi^s, nw), intent(in) | w, |
double precision, dimension(ixi^s,1:ndim), intent(in) | x, | ||
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
integer, intent(in) | idim, | ||
double precision, dimension(ixi^s), intent(out) | csound | ||
) |
Calculate fast magnetosonic wave speed.
Definition at line 2829 of file mod_mhd_phys.t.
subroutine, public mod_mhd_phys::mhd_get_csound2 | ( | double precision, dimension(ixi^s,nw), intent(in) | w, |
double precision, dimension(ixi^s,1:ndim), intent(in) | x, | ||
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s), intent(out) | csound2 | ||
) |
Calculate the square of the thermal sound speed csound2 within ixO^L. csound2=gamma*p/rho.
Definition at line 3212 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::mhd_get_csound_prim | ( | double precision, dimension(ixi^s, nw), intent(in) | w, |
double precision, dimension(ixi^s,1:ndim), intent(in) | x, | ||
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
integer, intent(in) | idim, | ||
double precision, dimension(ixi^s), intent(out) | csound | ||
) |
Calculate fast magnetosonic wave speed.
Definition at line 2877 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::mhd_get_csound_semirelati | ( | double precision, dimension(ixi^s, nw), intent(in) | w, |
double precision, dimension(ixi^s,1:ndim), intent(in) | x, | ||
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
integer, intent(in) | idim, | ||
double precision, dimension(ixo^s), intent(out) | csound, | ||
double precision, dimension(ixo^s), intent(out) | gamma2 | ||
) |
Calculate cmax_idim for semirelativistic MHD.
Definition at line 2932 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::mhd_get_ct_velocity | ( | type(ct_velocity), intent(inout) | vcts, |
double precision, dimension(ixi^s, nw), intent(in) | wLp, | ||
double precision, dimension(ixi^s, nw), intent(in) | wRp, | ||
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
integer, intent(in) | idim, | ||
double precision, dimension(ixi^s), intent(in) | cmax, | ||
double precision, dimension(ixi^s), intent(in), optional | cmin | ||
) |
prepare velocities for ct methods
Definition at line 2776 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::mhd_get_dt | ( | double precision, dimension(ixi^s,1:nw), intent(in) | w, |
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, intent(inout) | dtnew, | ||
double precision, intent(in) | dx, | ||
double precision, intent(in) | D, | ||
double precision, dimension(ixi^s,1:ndim), intent(in) | x | ||
) |
If resistivity is not zero, check diffusion time limit for dt.
Definition at line 5154 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::mhd_get_flux | ( | double precision, dimension(ixi^s,nw), intent(in) | wC, |
double precision, dimension(ixi^s,nw), intent(in) | w, | ||
double precision, dimension(ixi^s,1:ndim), intent(in) | x, | ||
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
integer, intent(in) | idim, | ||
double precision, dimension(ixi^s,nwflux), intent(out) | f | ||
) |
Calculate fluxes within ixO^L without any splitting.
Definition at line 3245 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::mhd_get_flux_hde | ( | double precision, dimension(ixi^s,nw), intent(in) | wC, |
double precision, dimension(ixi^s,nw), intent(in) | w, | ||
double precision, dimension(ixi^s,1:ndim), intent(in) | x, | ||
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
integer, intent(in) | idim, | ||
double precision, dimension(ixi^s,nwflux), intent(out) | f | ||
) |
Calculate fluxes within ixO^L without any splitting.
Definition at line 3378 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::mhd_get_flux_semirelati | ( | double precision, dimension(ixi^s,nw), intent(in) | wC, |
double precision, dimension(ixi^s,nw), intent(in) | w, | ||
double precision, dimension(ixi^s,1:ndim), intent(in) | x, | ||
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
integer, intent(in) | idim, | ||
double precision, dimension(ixi^s,nwflux), intent(out) | f | ||
) |
Calculate semirelativistic fluxes within ixO^L without any splitting.
Definition at line 3672 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::mhd_get_flux_split | ( | double precision, dimension(ixi^s,nw), intent(in) | wC, |
double precision, dimension(ixi^s,nw), intent(in) | w, | ||
double precision, dimension(ixi^s,1:ndim), intent(in) | x, | ||
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
integer, intent(in) | idim, | ||
double precision, dimension(ixi^s,nwflux), intent(out) | f | ||
) |
Calculate fluxes within ixO^L with possible splitting.
Definition at line 3489 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::mhd_get_h_speed | ( | double precision, dimension(ixi^s, nw), intent(in) | wprim, |
double precision, dimension(ixi^s,1:ndim), intent(in) | x, | ||
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
integer, intent(in) | idim, | ||
double precision, dimension(ixi^s,1:number_species), intent(out) | Hspeed | ||
) |
get H speed for H-correction to fix the carbuncle problem at grid-aligned shock front
Definition at line 2544 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::mhd_get_jambi | ( | double precision, dimension(ixi^s,nw), intent(in) | w, |
double precision, dimension(ixi^s,1:ndim), intent(in) | x, | ||
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(:^d&,:), intent(inout), allocatable | res | ||
) |
subroutine mod_mhd_phys::mhd_get_jxbxb | ( | double precision, dimension(ixi^s,nw), intent(in) | w, |
double precision, dimension(ixi^s,1:ndim), intent(in) | x, | ||
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(:^d&,:), intent(out) | res | ||
) |
subroutine mod_mhd_phys::mhd_get_p_total | ( | double precision, dimension(ixi^s,nw), intent(in) | w, |
double precision, dimension(ixi^s,1:ndim), intent(in) | x, | ||
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s), intent(out) | p | ||
) |
Calculate total pressure within ixO^L including magnetic pressure.
Definition at line 3230 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::mhd_get_pe_equi | ( | double precision, dimension(ixi^s, 1:nw), intent(in) | w, |
double precision, dimension(ixi^s, 1:ndim), intent(in) | x, | ||
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s), intent(out) | res | ||
) |
Definition at line 3188 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::mhd_get_pthermal_hde | ( | double precision, dimension(ixi^s,nw), intent(in) | w, |
double precision, dimension(ixi^s,1:ndim), intent(in) | x, | ||
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s), intent(out) | pth | ||
) |
Calculate thermal pressure=(gamma-1)*(e-0.5*m**2/rho-b**2/2) within ixO^L.
Definition at line 3079 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::mhd_get_pthermal_origin | ( | double precision, dimension(ixi^s,nw), intent(in) | w, |
double precision, dimension(ixi^s,1:ndim), intent(in) | x, | ||
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s), intent(out) | pth | ||
) |
Calculate thermal pressure=(gamma-1)*(e-0.5*m**2/rho-b**2/2) within ixO^L.
Definition at line 2981 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::mhd_get_pthermal_semirelati | ( | double precision, dimension(ixi^s,nw), intent(in) | w, |
double precision, dimension(ixi^s,1:ndim), intent(in) | x, | ||
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s), intent(out) | pth | ||
) |
Calculate thermal pressure=(gamma-1)*(e-0.5*m**2/rho-b**2/2) within ixO^L.
Definition at line 3037 of file mod_mhd_phys.t.
subroutine, public mod_mhd_phys::mhd_get_rho | ( | double precision, dimension(ixi^s,1:nw), intent(in) | w, |
double precision, dimension(ixi^s,1:ndim), intent(in) | x, | ||
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s), intent(out) | rho | ||
) |
Definition at line 4380 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::mhd_get_rho_equi | ( | double precision, dimension(ixi^s, 1:nw), intent(in) | w, |
double precision, dimension(ixi^s, 1:ndim), intent(in) | x, | ||
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s), intent(out) | res | ||
) |
Definition at line 3179 of file mod_mhd_phys.t.
double precision function mod_mhd_phys::mhd_get_tc_dt_mhd | ( | double precision, dimension(ixi^s,1:nw), intent(in) | w, |
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, intent(in) | dx, | ||
double precision, intent(in) | D, | ||
double precision, dimension(ixi^s,1:ndim), intent(in) | x | ||
) |
subroutine mod_mhd_phys::mhd_get_tcutoff | ( | integer, intent(in) | ixI, |
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s,1:nw), intent(inout) | w, | ||
double precision, dimension(ixi^s,1:ndim), intent(in) | x, | ||
double precision, intent(out) | Tco_local, | ||
double precision, intent(out) | Tmax_local | ||
) |
get adaptive cutoff temperature for TRAC (Johnston 2019 ApJL, 873, L22)
test case, fixed cutoff temperature
iijima et al. 2021, LTRAC method
test case, fixed cutoff temperature
iijima et al. 2021, LTRAC method
do nothing here
Definition at line 2370 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::mhd_get_temperature_equi | ( | double precision, dimension(ixi^s, 1:nw), intent(in) | w, |
double precision, dimension(ixi^s, 1:ndim), intent(in) | x, | ||
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s), intent(out) | res | ||
) |
Definition at line 3170 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::mhd_get_temperature_from_eint | ( | double precision, dimension(ixi^s, 1:nw), intent(in) | w, |
double precision, dimension(ixi^s, 1:ndim), intent(in) | x, | ||
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s), intent(out) | res | ||
) |
Calculate temperature=p/rho when in e_ the internal energy is stored.
Definition at line 3125 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::mhd_get_temperature_from_eint_with_equi | ( | double precision, dimension(ixi^s, 1:nw), intent(in) | w, |
double precision, dimension(ixi^s, 1:ndim), intent(in) | x, | ||
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s), intent(out) | res | ||
) |
Definition at line 3160 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::mhd_get_temperature_from_etot | ( | double precision, dimension(ixi^s, 1:nw), intent(in) | w, |
double precision, dimension(ixi^s, 1:ndim), intent(in) | x, | ||
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s), intent(out) | res | ||
) |
Calculate temperature=p/rho when in e_ the total energy is stored this does not check the values of mhd_energy and mhd_internal_e, mhd_energy = .true. and mhd_internal_e = .false. also check small_values is avoided.
Definition at line 3138 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::mhd_get_temperature_from_etot_with_equi | ( | double precision, dimension(ixi^s, 1:nw), intent(in) | w, |
double precision, dimension(ixi^s, 1:ndim), intent(in) | x, | ||
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s), intent(out) | res | ||
) |
subroutine mod_mhd_phys::mhd_get_temperature_from_hde | ( | double precision, dimension(ixi^s, 1:nw), intent(in) | w, |
double precision, dimension(ixi^s, 1:ndim), intent(in) | x, | ||
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s), intent(out) | res | ||
) |
Calculate temperature from hydrodynamic energy.
Definition at line 3150 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::mhd_get_v_boris | ( | double precision, dimension(ixi^s,nw), intent(in) | w, |
double precision, dimension(ixi^s,1:ndim), intent(in) | x, | ||
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s,ndir), intent(out) | v | ||
) |
Calculate v vector.
Definition at line 2238 of file mod_mhd_phys.t.
subroutine, public mod_mhd_phys::mhd_get_v_idim | ( | double precision, dimension(ixi^s,nw), intent(in) | w, |
double precision, dimension(ixi^s,1:ndim), intent(in) | x, | ||
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
integer, intent(in) | idim, | ||
double precision, dimension(ixi^s), intent(out) | v | ||
) |
Calculate v component.
Definition at line 2260 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::mhd_get_v_origin | ( | double precision, dimension(ixi^s,nw), intent(in) | w, |
double precision, dimension(ixi^s,1:ndim), intent(in) | x, | ||
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s,ndir), intent(out) | v | ||
) |
Calculate v vector.
Definition at line 2217 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::mhd_getv_hall | ( | double precision, dimension(ixi^s,nw), intent(in) | w, |
double precision, dimension(ixi^s,1:ndim), intent(in) | x, | ||
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s,1:3), intent(inout) | vHall | ||
) |
subroutine mod_mhd_phys::mhd_handle_small_ei | ( | double precision, dimension(ixi^s,1:nw), intent(inout) | w, |
double precision, dimension(ixi^s,1:ndim), intent(in) | x, | ||
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
integer, intent(in) | ie, | ||
character(len=*), intent(in) | subname | ||
) |
handle small or negative internal energy
Definition at line 4395 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::mhd_handle_small_values_hde | ( | logical, intent(in) | primitive, |
double precision, dimension(ixi^s,1:nw), intent(inout) | w, | ||
double precision, dimension(ixi^s,1:ndim), intent(in) | x, | ||
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
character(len=*), intent(in) | subname | ||
) |
subroutine mod_mhd_phys::mhd_handle_small_values_origin | ( | logical, intent(in) | primitive, |
double precision, dimension(ixi^s,1:nw), intent(inout) | w, | ||
double precision, dimension(ixi^s,1:ndim), intent(in) | x, | ||
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
character(len=*), intent(in) | subname | ||
) |
subroutine mod_mhd_phys::mhd_handle_small_values_semirelati | ( | logical, intent(in) | primitive, |
double precision, dimension(ixi^s,1:nw), intent(inout) | w, | ||
double precision, dimension(ixi^s,1:ndim), intent(in) | x, | ||
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
character(len=*), intent(in) | subname | ||
) |
Definition at line 1923 of file mod_mhd_phys.t.
double precision function, dimension(ixo^s) mod_mhd_phys::mhd_kin_en_boris | ( | double precision, dimension(ixi^s, nw), intent(in) | w, |
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixo^s), intent(in), optional | inv_rho | ||
) |
compute kinetic energy
Definition at line 5538 of file mod_mhd_phys.t.
double precision function, dimension(ixo^s) mod_mhd_phys::mhd_kin_en_origin | ( | double precision, dimension(ixi^s, nw), intent(in) | w, |
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixo^s), intent(in), optional | inv_rho | ||
) |
compute kinetic energy
Definition at line 5519 of file mod_mhd_phys.t.
double precision function, dimension(ixo^s) mod_mhd_phys::mhd_mag_en | ( | double precision, dimension(ixi^s, nw), intent(in) | w, |
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L | |||
) |
Compute evolving magnetic energy.
Definition at line 5509 of file mod_mhd_phys.t.
double precision function, dimension(ixo^s), public mod_mhd_phys::mhd_mag_en_all | ( | double precision, dimension(ixi^s, nw), intent(in) | w, |
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L | |||
) |
Compute 2 times total magnetic energy.
Definition at line 5481 of file mod_mhd_phys.t.
double precision function, dimension(ixo^s) mod_mhd_phys::mhd_mag_i_all | ( | double precision, dimension(ixi^s, nw), intent(in) | w, |
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
integer, intent(in) | idir | ||
) |
Compute full magnetic field by direction.
Definition at line 5495 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::mhd_modify_wlr | ( | integer, intent(in) | ixI, |
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, intent(in) | qt, | ||
double precision, dimension(ixi^s,1:nw), intent(inout) | wLC, | ||
double precision, dimension(ixi^s,1:nw), intent(inout) | wRC, | ||
double precision, dimension(ixi^s,1:nw), intent(inout) | wLp, | ||
double precision, dimension(ixi^s,1:nw), intent(inout) | wRp, | ||
type(state) | s, | ||
integer, intent(in) | idir | ||
) |
Definition at line 5633 of file mod_mhd_phys.t.
subroutine, public mod_mhd_phys::mhd_phys_init |
Definition at line 371 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::mhd_physical_units |
Definition at line 1169 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::mhd_sts_set_source_tc_mhd | ( | integer, intent(in) | ixI, |
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s,1:nw), intent(inout) | w, | ||
double precision, dimension(ixi^s,1:ndim), intent(in) | x, | ||
double precision, dimension(ixi^s,1:nw), intent(inout) | wres, | ||
logical, intent(in) | fix_conserve_at_step, | ||
double precision, intent(in) | my_dt, | ||
integer, intent(in) | igrid, | ||
integer, intent(in) | nflux | ||
) |
subroutine mod_mhd_phys::mhd_tc_handle_small_e | ( | double precision, dimension(ixi^s,1:nw), intent(inout) | w, |
double precision, dimension(ixi^s,1:ndim), intent(in) | x, | ||
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
integer, intent(in) | step | ||
) |
subroutine mod_mhd_phys::mhd_te_images |
subroutine mod_mhd_phys::mhd_to_conserved_hde | ( | integer, intent(in) | ixI, |
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s, nw), intent(inout) | w, | ||
double precision, dimension(ixi^s, 1:ndim), intent(in) | x | ||
) |
Transform primitive variables into conservative ones.
Definition at line 1411 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::mhd_to_conserved_inte | ( | integer, intent(in) | ixI, |
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s, nw), intent(inout) | w, | ||
double precision, dimension(ixi^s, 1:ndim), intent(in) | x | ||
) |
Transform primitive variables into conservative ones.
Definition at line 1436 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::mhd_to_conserved_origin | ( | integer, intent(in) | ixI, |
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s, nw), intent(inout) | w, | ||
double precision, dimension(ixi^s, 1:ndim), intent(in) | x | ||
) |
Transform primitive variables into conservative ones.
Definition at line 1375 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::mhd_to_conserved_semirelati | ( | integer, intent(in) | ixI, |
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s, nw), intent(inout) | w, | ||
double precision, dimension(ixi^s, 1:ndim), intent(in) | x | ||
) |
Transform primitive variables into conservative ones.
Definition at line 1501 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::mhd_to_conserved_split_rho | ( | integer, intent(in) | ixI, |
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s, nw), intent(inout) | w, | ||
double precision, dimension(ixi^s, 1:ndim), intent(in) | x | ||
) |
Transform primitive variables into conservative ones.
Definition at line 1469 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::mhd_to_primitive_hde | ( | integer, intent(in) | ixI, |
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s, nw), intent(inout) | w, | ||
double precision, dimension(ixi^s, 1:ndim), intent(in) | x | ||
) |
Transform conservative variables into primitive ones.
Definition at line 1610 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::mhd_to_primitive_inte | ( | integer, intent(in) | ixI, |
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s, nw), intent(inout) | w, | ||
double precision, dimension(ixi^s, 1:ndim), intent(in) | x | ||
) |
Transform conservative variables into primitive ones.
Definition at line 1639 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::mhd_to_primitive_origin | ( | integer, intent(in) | ixI, |
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s, nw), intent(inout) | w, | ||
double precision, dimension(ixi^s, 1:ndim), intent(in) | x | ||
) |
Transform conservative variables into primitive ones.
Definition at line 1570 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::mhd_to_primitive_semirelati | ( | integer, intent(in) | ixI, |
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s, nw), intent(inout) | w, | ||
double precision, dimension(ixi^s, 1:ndim), intent(in) | x | ||
) |
Transform conservative variables into primitive ones.
Definition at line 1711 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::mhd_to_primitive_split_rho | ( | integer, intent(in) | ixI, |
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s, nw), intent(inout) | w, | ||
double precision, dimension(ixi^s, 1:ndim), intent(in) | x | ||
) |
Transform conservative variables into primitive ones.
Definition at line 1676 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::mhd_update_faces | ( | integer, intent(in) | ixI, |
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, intent(in) | qt, | ||
double precision, intent(in) | qdt, | ||
double precision, dimension(ixi^s,1:nw), intent(in) | wprim, | ||
double precision, dimension(ixi^s,1:nwflux,1:ndim), intent(in) | fC, | ||
double precision, dimension(ixi^s,7-2*ndim:3), intent(inout) | fE, | ||
type(state) | sCT, | ||
type(state) | s, | ||
type(ct_velocity) | vcts | ||
) |
subroutine mod_mhd_phys::mhd_write_info | ( | integer, intent(in) | fh | ) |
Write this module's parameters to a snapsoht.
Definition at line 341 of file mod_mhd_phys.t.
subroutine, public mod_mhd_phys::multiplyambicoef | ( | integer, intent(in) | ixI, |
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s), intent(inout) | res, | ||
double precision, dimension(ixi^s,1:nw), intent(in) | w, | ||
double precision, dimension(ixi^s,1:ndim), intent(in) | x | ||
) |
multiply res by the ambipolar coefficient The ambipolar coefficient is calculated as -mhd_eta_ambi/rho^2 The user may mask its value in the user file by implemneting usr_mask_ambipolar subroutine
Definition at line 4090 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::rc_params_read | ( | type(rc_fluid), intent(inout) | fl | ) |
Name of cooling curve
Name of cooling method
Fixed temperature not lower than tlow
Lower limit of temperature
Add cooling source in a split way (.true.) or un-split way (.false.)
Definition at line 1002 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::set_equi_vars_grid | ( | integer, intent(in) | igrid | ) |
sets the equilibrium variables
Definition at line 1091 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::set_equi_vars_grid_faces | ( | integer, intent(in) | igrid, |
double precision, dimension(ixi^s,1:ndim), intent(in) | x, | ||
integer, intent(in) | ixI, | ||
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L | |||
) |
sets the equilibrium variables
Definition at line 1047 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::sts_set_source_ambipolar | ( | integer, intent(in) | ixI, |
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s,1:nw), intent(inout) | w, | ||
double precision, dimension(ixi^s,1:ndim), intent(in) | x, | ||
double precision, dimension(ixi^s,1:nw), intent(inout) | wres, | ||
logical, intent(in) | fix_conserve_at_step, | ||
double precision, intent(in) | my_dt, | ||
integer, intent(in) | igrid, | ||
integer, intent(in) | nflux | ||
) |
Sets the sources for the ambipolar this is used for the STS method.
at the corresponding indices store_flux_var is explicitly called for each of the fluxes one by one
Definition at line 3843 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::tc_params_read_mhd | ( | type(tc_fluid), intent(inout) | fl | ) |
Definition at line 972 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::update_faces_ambipolar | ( | integer, intent(in) | ixI, |
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, dimension(ixi^s,1:nw), intent(in) | w, | ||
double precision, dimension(ixi^s,1:ndim), intent(in) | x, | ||
double precision, dimension(ixi^s,1:3), intent(in) | ECC, | ||
double precision, dimension(ixi^s,7-2*ndim:3), intent(out) | fE, | ||
double precision, dimension(ixi^s,1:ndim), intent(out) | circ | ||
) |
get ambipolar electric field and the integrals around cell faces
Definition at line 3948 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::update_faces_average | ( | integer, intent(in) | ixI, |
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, intent(in) | qt, | ||
double precision, intent(in) | qdt, | ||
double precision, dimension(ixi^s,1:nwflux,1:ndim), intent(in) | fC, | ||
double precision, dimension(ixi^s,7-2*ndim:3), intent(inout) | fE, | ||
type(state) | sCT, | ||
type(state) | s | ||
) |
get electric field though averaging neighors to update faces in CT
Definition at line 6280 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::update_faces_contact | ( | integer, intent(in) | ixI, |
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, intent(in) | qt, | ||
double precision, intent(in) | qdt, | ||
double precision, dimension(ixi^s,1:nw), intent(in) | wp, | ||
double precision, dimension(ixi^s,1:nwflux,1:ndim), intent(in) | fC, | ||
double precision, dimension(ixi^s,7-2*ndim:3), intent(inout) | fE, | ||
type(state) | sCT, | ||
type(state) | s, | ||
type(ct_velocity) | vcts | ||
) |
update faces using UCT contact mode by Gardiner and Stone 2005 JCP 205, 509
Definition at line 6379 of file mod_mhd_phys.t.
subroutine mod_mhd_phys::update_faces_hll | ( | integer, intent(in) | ixI, |
integer, intent(in) | L, | ||
integer, intent(in) | ixO, | ||
L, | |||
double precision, intent(in) | qt, | ||
double precision, intent(in) | qdt, | ||
double precision, dimension(ixi^s,7-2*ndim:3), intent(inout) | fE, | ||
type(state) | sCT, | ||
type(state) | s, | ||
type(ct_velocity) | vcts | ||
) |
update faces
Definition at line 6552 of file mod_mhd_phys.t.
logical, public, protected mod_mhd_phys::b0field_forcefree =.true. |
B0 field is force-free.
Definition at line 227 of file mod_mhd_phys.t.
logical, dimension(2*^nd), public, protected mod_mhd_phys::boundary_divbfix =.true. |
To control divB=0 fix for boundary.
Definition at line 221 of file mod_mhd_phys.t.
integer, dimension(2*^nd), public, protected mod_mhd_phys::boundary_divbfix_skip =0 |
To skip * layer of ghost cells during divB=0 fix for boundary.
Definition at line 224 of file mod_mhd_phys.t.
logical, public mod_mhd_phys::clean_initial_divb = .false. |
clean initial divB
Definition at line 198 of file mod_mhd_phys.t.
logical, public mod_mhd_phys::divbwave = .true. |
Add divB wave in Roe solver.
Definition at line 195 of file mod_mhd_phys.t.
integer, public, protected mod_mhd_phys::e_ |
Index of the energy density (-1 if not present)
Definition at line 127 of file mod_mhd_phys.t.
integer, public, protected mod_mhd_phys::eaux_ |
Indices of auxiliary internal energy.
Definition at line 139 of file mod_mhd_phys.t.
logical, public, protected mod_mhd_phys::eq_state_units = .true. |
Definition at line 218 of file mod_mhd_phys.t.
integer, public mod_mhd_phys::equi_pe0_ = -1 |
Definition at line 112 of file mod_mhd_phys.t.
integer, public mod_mhd_phys::equi_rho0_ = -1 |
equi vars indices in the stateequi_vars array
Definition at line 111 of file mod_mhd_phys.t.
double precision, public, protected mod_mhd_phys::h_ion_fr =1d0 |
Ionization fraction of H H_ion_fr = H+/(H+ + H)
Definition at line 204 of file mod_mhd_phys.t.
logical, public mod_mhd_phys::has_equi_pe0 = .false. |
whether split off equilibrium thermal pressure
Definition at line 107 of file mod_mhd_phys.t.
logical, public mod_mhd_phys::has_equi_rho0 = .false. |
whether split off equilibrium density
Definition at line 105 of file mod_mhd_phys.t.
double precision, public, protected mod_mhd_phys::he_abundance =0.1d0 |
Helium abundance over Hydrogen.
Definition at line 201 of file mod_mhd_phys.t.
double precision, public, protected mod_mhd_phys::he_ion_fr =1d0 |
Ionization fraction of He He_ion_fr = (He2+ + He+)/(He2+ + He+ + He)
Definition at line 207 of file mod_mhd_phys.t.
double precision, public, protected mod_mhd_phys::he_ion_fr2 =1d0 |
Ratio of number He2+ / number He+ + He2+ He_ion_fr2 = He2+/(He2+ + He+)
Definition at line 210 of file mod_mhd_phys.t.
integer, dimension(:), allocatable, public, protected mod_mhd_phys::mag |
Indices of the magnetic field.
Definition at line 133 of file mod_mhd_phys.t.
logical, public, protected mod_mhd_phys::mhd_4th_order = .false. |
MHD fourth order.
Definition at line 102 of file mod_mhd_phys.t.
double precision, public mod_mhd_phys::mhd_adiab = 1.0d0 |
The adiabatic constant.
Definition at line 153 of file mod_mhd_phys.t.
logical, public, protected mod_mhd_phys::mhd_ambipolar = .false. |
Whether Ambipolar term is used.
Definition at line 39 of file mod_mhd_phys.t.
logical, public, protected mod_mhd_phys::mhd_ambipolar_exp = .false. |
Whether Ambipolar term is implemented explicitly.
Definition at line 45 of file mod_mhd_phys.t.
logical, public, protected mod_mhd_phys::mhd_ambipolar_sts = .false. |
Whether Ambipolar term is implemented using supertimestepping.
Definition at line 42 of file mod_mhd_phys.t.
logical, public, protected mod_mhd_phys::mhd_boris_simplification = .false. |
Whether boris simplified semirelativistic MHD equations (Gombosi 2002 JCP) are solved.
Definition at line 93 of file mod_mhd_phys.t.
logical, public, protected mod_mhd_phys::mhd_cak_force = .false. |
Whether CAK radiation line force is activated.
Definition at line 99 of file mod_mhd_phys.t.
logical, public, protected mod_mhd_phys::mhd_divb_4thorder = .false. |
Whether divB is computed with a fourth order approximation.
Definition at line 180 of file mod_mhd_phys.t.
logical, public, protected mod_mhd_phys::mhd_dump_full_vars = .false. |
whether dump full variables (when splitting is used) in a separate dat file
Definition at line 115 of file mod_mhd_phys.t.
logical, public, protected mod_mhd_phys::mhd_energy = .true. |
Whether an energy equation is used.
Definition at line 16 of file mod_mhd_phys.t.
logical, public mod_mhd_phys::mhd_equi_thermal = .false. |
Definition at line 108 of file mod_mhd_phys.t.
double precision, public mod_mhd_phys::mhd_eta = 0.0d0 |
The MHD resistivity.
Definition at line 156 of file mod_mhd_phys.t.
double precision, public mod_mhd_phys::mhd_eta_ambi = 0.0d0 |
The MHD ambipolar coefficient.
Definition at line 165 of file mod_mhd_phys.t.
double precision, public mod_mhd_phys::mhd_eta_hyper = 0.0d0 |
The MHD hyper-resistivity.
Definition at line 159 of file mod_mhd_phys.t.
double precision, public mod_mhd_phys::mhd_etah = 0.0d0 |
TODO: what is this?
Definition at line 162 of file mod_mhd_phys.t.
double precision, public mod_mhd_phys::mhd_gamma = 5.d0/3.0d0 |
The adiabatic index.
Definition at line 150 of file mod_mhd_phys.t.
procedure(sub_get_pthermal), pointer, public mod_mhd_phys::mhd_get_pthermal => null() |
Definition at line 282 of file mod_mhd_phys.t.
procedure(sub_get_v), pointer, public mod_mhd_phys::mhd_get_v => null() |
Definition at line 283 of file mod_mhd_phys.t.
logical, public, protected mod_mhd_phys::mhd_glm = .false. |
Whether GLM-MHD is used to control div B.
Definition at line 54 of file mod_mhd_phys.t.
double precision, public mod_mhd_phys::mhd_glm_alpha = 0.5d0 |
GLM-MHD parameter: ratio of the diffusive and advective time scales for div b taking values within [0, 1].
Definition at line 86 of file mod_mhd_phys.t.
logical, public, protected mod_mhd_phys::mhd_glm_extended = .true. |
Whether extended GLM-MHD is used with additional sources.
Definition at line 57 of file mod_mhd_phys.t.
logical, public, protected mod_mhd_phys::mhd_gravity = .false. |
Whether gravity is added.
Definition at line 33 of file mod_mhd_phys.t.
logical, public, protected mod_mhd_phys::mhd_hall = .false. |
Whether Hall-MHD is used.
Definition at line 36 of file mod_mhd_phys.t.
logical, public, protected mod_mhd_phys::mhd_hydrodynamic_e = .false. |
Whether hydrodynamic energy is solved instead of total energy.
Definition at line 79 of file mod_mhd_phys.t.
logical, public, protected mod_mhd_phys::mhd_internal_e = .false. |
Whether internal energy is solved instead of total energy.
Definition at line 75 of file mod_mhd_phys.t.
procedure(fun_kin_en), pointer, public mod_mhd_phys::mhd_kin_en => null() |
Definition at line 284 of file mod_mhd_phys.t.
logical, public, protected mod_mhd_phys::mhd_magnetofriction = .false. |
Whether magnetofriction is added.
Definition at line 51 of file mod_mhd_phys.t.
integer, public, protected mod_mhd_phys::mhd_n_tracer = 0 |
Number of tracer species.
Definition at line 118 of file mod_mhd_phys.t.
logical, public, protected mod_mhd_phys::mhd_particles = .false. |
Whether particles module is added.
Definition at line 48 of file mod_mhd_phys.t.
logical, public, protected mod_mhd_phys::mhd_radiative_cooling = .false. |
Whether radiative cooling is added.
Definition at line 25 of file mod_mhd_phys.t.
double precision, public, protected mod_mhd_phys::mhd_reduced_c = const_c |
Reduced speed of light for semirelativistic MHD.
Definition at line 96 of file mod_mhd_phys.t.
logical, public, protected mod_mhd_phys::mhd_semirelativistic = .false. |
Whether semirelativistic MHD equations (Gombosi 2002 JCP) are solved.
Definition at line 90 of file mod_mhd_phys.t.
logical, public, protected mod_mhd_phys::mhd_solve_eaux = .false. |
Whether auxiliary internal energy is solved.
Definition at line 72 of file mod_mhd_phys.t.
logical, public, protected mod_mhd_phys::mhd_thermal_conduction = .false. |
Whether thermal conduction is used.
Definition at line 19 of file mod_mhd_phys.t.
procedure(sub_convert), pointer, public mod_mhd_phys::mhd_to_conserved => null() |
Definition at line 280 of file mod_mhd_phys.t.
procedure(sub_convert), pointer, public mod_mhd_phys::mhd_to_primitive => null() |
Definition at line 279 of file mod_mhd_phys.t.
logical, public, protected mod_mhd_phys::mhd_trac = .false. |
Whether TRAC method is used.
Definition at line 60 of file mod_mhd_phys.t.
integer, public, protected mod_mhd_phys::mhd_trac_finegrid =4 |
Distance between two adjacent traced magnetic field lines (in finest cell size)
Definition at line 69 of file mod_mhd_phys.t.
double precision, public, protected mod_mhd_phys::mhd_trac_mask = 0.d0 |
Height of the mask used in the TRAC method.
Definition at line 66 of file mod_mhd_phys.t.
integer, public, protected mod_mhd_phys::mhd_trac_type =1 |
Which TRAC method is used.
Definition at line 63 of file mod_mhd_phys.t.
logical, public, protected mod_mhd_phys::mhd_viscosity = .false. |
Whether viscosity is added.
Definition at line 30 of file mod_mhd_phys.t.
integer, dimension(:), allocatable, public, protected mod_mhd_phys::mom |
Indices of the momentum density.
Definition at line 124 of file mod_mhd_phys.t.
integer, public, protected mod_mhd_phys::p_ |
Index of the gas pressure (-1 if not present) should equal e_.
Definition at line 130 of file mod_mhd_phys.t.
integer, public, protected mod_mhd_phys::paux_ |
Definition at line 140 of file mod_mhd_phys.t.
integer, public, protected mod_mhd_phys::psi_ |
Indices of the GLM psi.
Definition at line 136 of file mod_mhd_phys.t.
type(rc_fluid), allocatable, public mod_mhd_phys::rc_fl |
type of fluid for radiative cooling
Definition at line 27 of file mod_mhd_phys.t.
integer, public, protected mod_mhd_phys::rho_ |
Index of the density (in the w array)
Definition at line 121 of file mod_mhd_phys.t.
double precision, public, protected mod_mhd_phys::rr =1d0 |
Definition at line 214 of file mod_mhd_phys.t.
logical, public, protected mod_mhd_phys::source_split_divb = .false. |
Whether divB cleaning sources are added splitting from fluid solver.
Definition at line 82 of file mod_mhd_phys.t.
type(tc_fluid), allocatable, public mod_mhd_phys::tc_fl |
type of fluid for thermal conduction
Definition at line 21 of file mod_mhd_phys.t.
integer, public, protected mod_mhd_phys::tcoff_ |
Index of the cutoff temperature for the TRAC method.
Definition at line 143 of file mod_mhd_phys.t.
type(te_fluid), allocatable, public mod_mhd_phys::te_fl_mhd |
Definition at line 22 of file mod_mhd_phys.t.
integer, dimension(:), allocatable, public, protected mod_mhd_phys::tracer |
Indices of the tracers.
Definition at line 147 of file mod_mhd_phys.t.
integer, public, protected mod_mhd_phys::tweight_ |
Definition at line 144 of file mod_mhd_phys.t.
character(len=std_len), public, protected mod_mhd_phys::type_ct = 'uct_contact' |
Method type of constrained transport.
Definition at line 177 of file mod_mhd_phys.t.
character(len=std_len), public, protected mod_mhd_phys::typedivbfix = 'linde' |
Method type to clean divergence of B.
Definition at line 174 of file mod_mhd_phys.t.
procedure(mask_subroutine), pointer, public mod_mhd_phys::usr_mask_ambipolar => null() |
Definition at line 277 of file mod_mhd_phys.t.
procedure(sub_get_pthermal), pointer, public mod_mhd_phys::usr_rfactor => null() |
Definition at line 278 of file mod_mhd_phys.t.