MPI-AMRVAC  3.1
The MPI - Adaptive Mesh Refinement - Versatile Advection Code
Data Types | Modules | Functions/Subroutines | Variables
mod_mhd_phys.t File Reference

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Data Types

interface  mod_mhd_phys::fun_kin_en
 

Modules

module  mod_mhd_phys
 Magneto-hydrodynamics module.
 

Functions/Subroutines

subroutine mod_mhd_phys::mhd_write_info (fh)
 Write this module's parameters to a snapsoht. More...
 
subroutine, public mod_mhd_phys::mhd_phys_init ()
 
subroutine mod_mhd_phys::mhd_te_images
 
subroutine mod_mhd_phys::mhd_sts_set_source_tc_mhd (ixIL, ixOL, w, x, wres, fix_conserve_at_step, my_dt, igrid, nflux)
 
double precision function mod_mhd_phys::mhd_get_tc_dt_mhd (w, ixIL, ixOL, dxD, x)
 
subroutine mod_mhd_phys::mhd_tc_handle_small_e (w, x, ixIL, ixOL, step)
 
subroutine mod_mhd_phys::tc_params_read_mhd (fl)
 
subroutine mod_mhd_phys::rc_params_read (fl)
 
subroutine mod_mhd_phys::set_equi_vars_grid_faces (igrid, x, ixIL, ixOL)
 sets the equilibrium variables More...
 
subroutine mod_mhd_phys::set_equi_vars_grid (igrid)
 sets the equilibrium variables More...
 
double precision function, dimension(ixo^s, 1:nwc) mod_mhd_phys::convert_vars_splitting (ixIL, ixOL, w, x, nwc)
 
subroutine mod_mhd_phys::mhd_check_params
 
subroutine mod_mhd_phys::mhd_physical_units ()
 
subroutine mod_mhd_phys::mhd_check_w_semirelati (primitive, ixIL, ixOL, w, flag)
 
subroutine mod_mhd_phys::mhd_check_w_origin (primitive, ixIL, ixOL, w, flag)
 
subroutine mod_mhd_phys::mhd_check_w_inte (primitive, ixIL, ixOL, w, flag)
 
subroutine mod_mhd_phys::mhd_check_w_hde (primitive, ixIL, ixOL, w, flag)
 
subroutine mod_mhd_phys::mhd_to_conserved_origin (ixIL, ixOL, w, x)
 Transform primitive variables into conservative ones. More...
 
subroutine mod_mhd_phys::mhd_to_conserved_hde (ixIL, ixOL, w, x)
 Transform primitive variables into conservative ones. More...
 
subroutine mod_mhd_phys::mhd_to_conserved_inte (ixIL, ixOL, w, x)
 Transform primitive variables into conservative ones. More...
 
subroutine mod_mhd_phys::mhd_to_conserved_split_rho (ixIL, ixOL, w, x)
 Transform primitive variables into conservative ones. More...
 
subroutine mod_mhd_phys::mhd_to_conserved_semirelati (ixIL, ixOL, w, x)
 Transform primitive variables into conservative ones. More...
 
subroutine mod_mhd_phys::mhd_to_primitive_origin (ixIL, ixOL, w, x)
 Transform conservative variables into primitive ones. More...
 
subroutine mod_mhd_phys::mhd_to_primitive_hde (ixIL, ixOL, w, x)
 Transform conservative variables into primitive ones. More...
 
subroutine mod_mhd_phys::mhd_to_primitive_inte (ixIL, ixOL, w, x)
 Transform conservative variables into primitive ones. More...
 
subroutine mod_mhd_phys::mhd_to_primitive_split_rho (ixIL, ixOL, w, x)
 Transform conservative variables into primitive ones. More...
 
subroutine mod_mhd_phys::mhd_to_primitive_semirelati (ixIL, ixOL, w, x)
 Transform conservative variables into primitive ones. More...
 
subroutine, public mod_mhd_phys::mhd_ei_to_e (ixIL, ixOL, w, x)
 Transform internal energy to total energy. More...
 
subroutine mod_mhd_phys::mhd_ei_to_e_hde (ixIL, ixOL, w, x)
 Transform internal energy to hydrodynamic energy. More...
 
subroutine mod_mhd_phys::mhd_ei_to_e_semirelati (ixIL, ixOL, w, x)
 Transform internal energy to total energy and velocity to momentum. More...
 
subroutine, public mod_mhd_phys::mhd_e_to_ei (ixIL, ixOL, w, x)
 Transform total energy to internal energy. More...
 
subroutine mod_mhd_phys::mhd_e_to_ei_hde (ixIL, ixOL, w, x)
 Transform hydrodynamic energy to internal energy. More...
 
subroutine mod_mhd_phys::mhd_e_to_ei_semirelati (ixIL, ixOL, w, x)
 Transform total energy to internal energy and momentum to velocity. More...
 
subroutine mod_mhd_phys::mhd_handle_small_values_semirelati (primitive, w, x, ixIL, ixOL, subname)
 
subroutine mod_mhd_phys::mhd_handle_small_values_origin (primitive, w, x, ixIL, ixOL, subname)
 
subroutine mod_mhd_phys::mhd_handle_small_values_inte (primitive, w, x, ixIL, ixOL, subname)
 
subroutine mod_mhd_phys::mhd_handle_small_values_hde (primitive, w, x, ixIL, ixOL, subname)
 
subroutine mod_mhd_phys::mhd_get_v_origin (w, x, ixIL, ixOL, v)
 Calculate v vector. More...
 
subroutine mod_mhd_phys::mhd_get_v_boris (w, x, ixIL, ixOL, v)
 Calculate v vector. More...
 
subroutine, public mod_mhd_phys::mhd_get_v_idim (w, x, ixIL, ixOL, idim, v)
 Calculate v component. More...
 
subroutine mod_mhd_phys::mhd_get_cmax_origin (w, x, ixIL, ixOL, idim, cmax)
 Calculate cmax_idim=csound+abs(v_idim) within ixO^L. More...
 
subroutine mod_mhd_phys::mhd_get_cmax_semirelati (w, x, ixIL, ixOL, idim, cmax)
 Calculate cmax_idim for semirelativistic MHD. More...
 
subroutine mod_mhd_phys::mhd_get_a2max (w, x, ixIL, ixOL, a2max)
 
subroutine mod_mhd_phys::mhd_get_tcutoff (ixIL, ixOL, w, x, Tco_local, Tmax_local)
 get adaptive cutoff temperature for TRAC (Johnston 2019 ApJL, 873, L22) More...
 
subroutine mod_mhd_phys::mhd_get_h_speed (wprim, x, ixIL, ixOL, idim, Hspeed)
 get H speed for H-correction to fix the carbuncle problem at grid-aligned shock front More...
 
subroutine mod_mhd_phys::mhd_get_cbounds (wLC, wRC, wLp, wRp, x, ixIL, ixOL, idim, Hspeed, cmax, cmin)
 Estimating bounds for the minimum and maximum signal velocities without split. More...
 
subroutine mod_mhd_phys::mhd_get_cbounds_semirelati (wLC, wRC, wLp, wRp, x, ixIL, ixOL, idim, Hspeed, cmax, cmin)
 Estimating bounds for the minimum and maximum signal velocities without split. More...
 
subroutine mod_mhd_phys::mhd_get_cbounds_split_rho (wLC, wRC, wLp, wRp, x, ixIL, ixOL, idim, Hspeed, cmax, cmin)
 Estimating bounds for the minimum and maximum signal velocities with rho split. More...
 
subroutine mod_mhd_phys::mhd_get_ct_velocity (vcts, wLp, wRp, ixIL, ixOL, idim, cmax, cmin)
 prepare velocities for ct methods More...
 
subroutine mod_mhd_phys::mhd_get_csound (w, x, ixIL, ixOL, idim, csound)
 Calculate fast magnetosonic wave speed. More...
 
subroutine mod_mhd_phys::mhd_get_csound_prim (w, x, ixIL, ixOL, idim, csound)
 Calculate fast magnetosonic wave speed. More...
 
subroutine mod_mhd_phys::mhd_get_csound_semirelati (w, x, ixIL, ixOL, idim, csound, gamma2)
 Calculate cmax_idim for semirelativistic MHD. More...
 
subroutine mod_mhd_phys::mhd_get_pthermal_iso (w, x, ixIL, ixOL, pth)
 Calculate isothermal thermal pressure. More...
 
subroutine mod_mhd_phys::mhd_get_pthermal_eint (w, x, ixIL, ixOL, pth)
 Calculate thermal pressure from internal energy. More...
 
subroutine mod_mhd_phys::mhd_get_pthermal_origin (w, x, ixIL, ixOL, pth)
 Calculate thermal pressure=(gamma-1)*(e-0.5*m**2/rho-b**2/2) within ixO^L. More...
 
subroutine mod_mhd_phys::mhd_get_pthermal_semirelati (w, x, ixIL, ixOL, pth)
 Calculate thermal pressure. More...
 
subroutine mod_mhd_phys::mhd_get_pthermal_hde (w, x, ixIL, ixOL, pth)
 Calculate thermal pressure=(gamma-1)*(e-0.5*m**2/rho) within ixO^L. More...
 
subroutine mod_mhd_phys::mhd_get_temperature_from_te (w, x, ixIL, ixOL, res)
 copy temperature from stored Te variable More...
 
subroutine mod_mhd_phys::mhd_get_temperature_from_eint (w, x, ixIL, ixOL, res)
 Calculate temperature=p/rho when in e_ the internal energy is stored. More...
 
subroutine mod_mhd_phys::mhd_get_temperature_from_etot (w, x, ixIL, ixOL, res)
 Calculate temperature=p/rho when in e_ the total energy is stored. More...
 
subroutine mod_mhd_phys::mhd_get_temperature_from_etot_with_equi (w, x, ixIL, ixOL, res)
 
subroutine mod_mhd_phys::mhd_get_temperature_from_eint_with_equi (w, x, ixIL, ixOL, res)
 
subroutine mod_mhd_phys::mhd_get_temperature_equi (w, x, ixIL, ixOL, res)
 
subroutine mod_mhd_phys::mhd_get_rho_equi (w, x, ixIL, ixOL, res)
 
subroutine mod_mhd_phys::mhd_get_pe_equi (w, x, ixIL, ixOL, res)
 
subroutine, public mod_mhd_phys::mhd_get_csound2 (w, x, ixIL, ixOL, csound2)
 Calculate the square of the thermal sound speed csound2 within ixO^L. csound2=gamma*p/rho. More...
 
subroutine mod_mhd_phys::mhd_get_p_total (w, x, ixIL, ixOL, p)
 Calculate total pressure within ixO^L including magnetic pressure. More...
 
subroutine mod_mhd_phys::mhd_get_flux (wC, w, x, ixIL, ixOL, idim, f)
 Calculate fluxes within ixO^L without any splitting. More...
 
subroutine mod_mhd_phys::mhd_get_flux_hde (wC, w, x, ixIL, ixOL, idim, f)
 Calculate fluxes within ixO^L without any splitting. More...
 
subroutine mod_mhd_phys::mhd_get_flux_split (wC, w, x, ixIL, ixOL, idim, f)
 Calculate fluxes within ixO^L with possible splitting. More...
 
subroutine mod_mhd_phys::mhd_get_flux_semirelati (wC, w, x, ixIL, ixOL, idim, f)
 Calculate semirelativistic fluxes within ixO^L without any splitting. More...
 
subroutine mod_mhd_phys::add_source_ambipolar_internal_energy (qdt, ixIL, ixOL, wCT, w, x, ie)
 Source terms J.E in internal energy. For the ambipolar term E = ambiCoef * JxBxB=ambiCoef * B^2(-J_perpB) More...
 
subroutine mod_mhd_phys::mhd_get_jxbxb (w, x, ixIL, ixOL, res)
 
subroutine mod_mhd_phys::sts_set_source_ambipolar (ixIL, ixOL, w, x, wres, fix_conserve_at_step, my_dt, igrid, nflux)
 Sets the sources for the ambipolar this is used for the STS method. More...
 
subroutine mod_mhd_phys::update_faces_ambipolar (ixIL, ixOL, w, x, ECC, fE, circ)
 get ambipolar electric field and the integrals around cell faces More...
 
subroutine mod_mhd_phys::get_flux_on_cell_face (ixIL, ixOL, ff, src)
 use cell-center flux to get cell-face flux and get the source term as the divergence of the flux More...
 
double precision function mod_mhd_phys::get_ambipolar_dt (w, ixIL, ixOL, dxD, x)
 Calculates the explicit dt for the ambipokar term This function is used by both explicit scheme and STS method. More...
 
subroutine, public mod_mhd_phys::multiplyambicoef (ixIL, ixOL, res, w, x)
 multiply res by the ambipolar coefficient The ambipolar coefficient is calculated as -mhd_eta_ambi/rho^2 The user may mask its value in the user file by implemneting usr_mask_ambipolar subroutine More...
 
subroutine mod_mhd_phys::mhd_add_source (qdt, dtfactor, ixIL, ixOL, wCT, wCTprim, w, x, qsourcesplit, active)
 w[iws]=w[iws]+qdt*S[iws,wCT] where S is the source based on wCT within ixO More...
 
subroutine mod_mhd_phys::add_pe0_divv (qdt, dtfactor, ixIL, ixOL, wCT, w, x)
 
subroutine mod_mhd_phys::get_lorentz_force (ixIL, ixOL, w, JxB)
 Compute the Lorentz force (JxB) More...
 
subroutine mod_mhd_phys::mhd_gamma2_alfven (ixIL, ixOL, w, gamma_A2)
 Compute 1/(1+v_A^2/c^2) for semirelativistic MHD, where v_A is the Alfven velocity. More...
 
double precision function, dimension(ixo^s) mod_mhd_phys::mhd_gamma_alfven (w, ixIL, ixOL)
 Compute 1/sqrt(1+v_A^2/c^2) for semirelativisitic MHD, where v_A is the Alfven velocity. More...
 
subroutine, public mod_mhd_phys::mhd_get_rho (w, x, ixIL, ixOL, rho)
 
subroutine mod_mhd_phys::mhd_handle_small_ei (w, x, ixIL, ixOL, ie, subname)
 handle small or negative internal energy More...
 
subroutine mod_mhd_phys::mhd_update_temperature (ixIL, ixOL, wCT, w, x)
 
subroutine mod_mhd_phys::add_source_b0split (qdt, dtfactor, ixIL, ixOL, wCT, w, x)
 Source terms after split off time-independent magnetic field. More...
 
subroutine mod_mhd_phys::add_source_semirelativistic (qdt, ixIL, ixOL, wCT, w, x, wCTprim)
 Source terms for semirelativistic MHD Gombosi 2002 JCP 177, 176. More...
 
subroutine mod_mhd_phys::add_source_internal_e (qdt, ixIL, ixOL, wCT, w, x, wCTprim)
 Source terms for internal energy version of MHD. More...
 
subroutine mod_mhd_phys::add_source_hydrodynamic_e (qdt, ixIL, ixOL, wCT, w, x, wCTprim)
 Source terms for hydrodynamic energy version of MHD. More...
 
subroutine mod_mhd_phys::add_source_res1 (qdt, ixIL, ixOL, wCT, w, x)
 Add resistive source to w within ixO Uses 3 point stencil (1 neighbour) in each direction, non-conservative. If the fourthorder precompiler flag is set, uses fourth order central difference for the laplacian. Then the stencil is 5 (2 neighbours). More...
 
subroutine mod_mhd_phys::add_source_res2 (qdt, ixIL, ixOL, wCT, w, x)
 Add resistive source to w within ixO Uses 5 point stencil (2 neighbours) in each direction, conservative. More...
 
subroutine mod_mhd_phys::add_source_hyperres (qdt, ixIL, ixOL, wCT, w, x)
 Add Hyper-resistive source to w within ixO Uses 9 point stencil (4 neighbours) in each direction. More...
 
subroutine mod_mhd_phys::add_source_glm (qdt, ixIL, ixOL, wCT, w, x)
 
subroutine mod_mhd_phys::add_source_powel (qdt, ixIL, ixOL, wCT, w, x)
 Add divB related sources to w within ixO corresponding to Powel. More...
 
subroutine mod_mhd_phys::add_source_janhunen (qdt, ixIL, ixOL, wCT, w, x)
 
subroutine mod_mhd_phys::add_source_linde (qdt, ixIL, ixOL, wCT, w, x)
 
subroutine, public mod_mhd_phys::get_normalized_divb (w, ixIL, ixOL, divb)
 get dimensionless div B = |divB| * volume / area / |B| More...
 
subroutine, public mod_mhd_phys::get_current (w, ixIL, ixOL, idirmin, current)
 Calculate idirmin and the idirmin:3 components of the common current array make sure that dxlevel(^D) is set correctly. More...
 
subroutine mod_mhd_phys::mhd_get_dt (w, ixIL, ixOL, dtnew, dxD, x)
 If resistivity is not zero, check diffusion time limit for dt. More...
 
subroutine mod_mhd_phys::mhd_add_source_geom (qdt, dtfactor, ixIL, ixOL, wCT, w, x)
 
subroutine mod_mhd_phys::mhd_add_source_geom_split (qdt, dtfactor, ixIL, ixOL, wCT, w, x)
 
double precision function, dimension(ixo^s), public mod_mhd_phys::mhd_mag_en_all (w, ixIL, ixOL)
 Compute 2 times total magnetic energy. More...
 
double precision function, dimension(ixo^s) mod_mhd_phys::mhd_mag_i_all (w, ixIL, ixOL, idir)
 Compute full magnetic field by direction. More...
 
double precision function, dimension(ixo^s) mod_mhd_phys::mhd_mag_en (w, ixIL, ixOL)
 Compute evolving magnetic energy. More...
 
double precision function, dimension(ixo^s) mod_mhd_phys::mhd_kin_en_origin (w, ixIL, ixOL, inv_rho)
 compute kinetic energy More...
 
double precision function, dimension(ixo^s) mod_mhd_phys::mhd_kin_en_boris (w, ixIL, ixOL, inv_rho)
 compute kinetic energy More...
 
subroutine mod_mhd_phys::mhd_getv_hall (w, x, ixIL, ixOL, vHall)
 
subroutine mod_mhd_phys::mhd_get_jambi (w, x, ixIL, ixOL, res)
 
subroutine mod_mhd_phys::mhd_modify_wlr (ixIL, ixOL, qt, wLC, wRC, wLp, wRp, s, idir)
 
subroutine mod_mhd_phys::mhd_boundary_adjust (igrid, psb)
 
subroutine mod_mhd_phys::fixdivb_boundary (ixGL, ixOL, w, x, iB)
 
subroutine, public mod_mhd_phys::mhd_clean_divb_multigrid (qdt, qt, active)
 
subroutine mod_mhd_phys::mhd_update_faces (ixIL, ixOL, qt, qdt, wprim, fC, fE, sCT, s, vcts)
 
subroutine mod_mhd_phys::update_faces_average (ixIL, ixOL, qt, qdt, fC, fE, sCT, s)
 get electric field though averaging neighors to update faces in CT More...
 
subroutine mod_mhd_phys::update_faces_contact (ixIL, ixOL, qt, qdt, wp, fC, fE, sCT, s, vcts)
 update faces using UCT contact mode by Gardiner and Stone 2005 JCP 205, 509 More...
 
subroutine mod_mhd_phys::update_faces_hll (ixIL, ixOL, qt, qdt, fE, sCT, s, vcts)
 update faces More...
 
subroutine mod_mhd_phys::get_resistive_electric_field (ixIL, ixOL, sCT, s, jce)
 calculate eta J at cell edges More...
 
subroutine mod_mhd_phys::get_ambipolar_electric_field (ixIL, ixOL, w, x, fE)
 get ambipolar electric field on cell edges More...
 
subroutine, public mod_mhd_phys::mhd_face_to_center (ixOL, s)
 calculate cell-center values from face-center values More...
 
subroutine, public mod_mhd_phys::b_from_vector_potential (ixIsL, ixIL, ixOL, ws, x)
 calculate magnetic field from vector potential More...
 
subroutine mod_mhd_phys::rfactor_from_temperature_ionization (w, x, ixIL, ixOL, Rfactor)
 
subroutine mod_mhd_phys::rfactor_from_constant_ionization (w, x, ixIL, ixOL, Rfactor)
 

Variables

logical, public, protected mod_mhd_phys::mhd_energy = .true.
 Whether an energy equation is used. More...
 
logical, public, protected mod_mhd_phys::mhd_thermal_conduction = .false.
 Whether thermal conduction is used. More...
 
type(tc_fluid), allocatable, public mod_mhd_phys::tc_fl
 type of fluid for thermal conduction More...
 
type(te_fluid), allocatable, public mod_mhd_phys::te_fl_mhd
 type of fluid for thermal emission synthesis More...
 
logical, public, protected mod_mhd_phys::mhd_radiative_cooling = .false.
 Whether radiative cooling is added. More...
 
type(rc_fluid), allocatable, public mod_mhd_phys::rc_fl
 type of fluid for radiative cooling More...
 
logical, public, protected mod_mhd_phys::mhd_viscosity = .false.
 Whether viscosity is added. More...
 
logical, public, protected mod_mhd_phys::mhd_gravity = .false.
 Whether gravity is added. More...
 
logical, public, protected mod_mhd_phys::mhd_rotating_frame = .false.
 Whether rotating frame is activated. More...
 
logical, public, protected mod_mhd_phys::mhd_hall = .false.
 Whether Hall-MHD is used. More...
 
logical, public, protected mod_mhd_phys::mhd_ambipolar = .false.
 Whether Ambipolar term is used. More...
 
logical, public, protected mod_mhd_phys::mhd_ambipolar_sts = .false.
 Whether Ambipolar term is implemented using supertimestepping. More...
 
logical, public, protected mod_mhd_phys::mhd_ambipolar_exp = .false.
 Whether Ambipolar term is implemented explicitly. More...
 
logical, public, protected mod_mhd_phys::mhd_particles = .false.
 Whether particles module is added. More...
 
logical, public, protected mod_mhd_phys::mhd_magnetofriction = .false.
 Whether magnetofriction is added. More...
 
logical, public, protected mod_mhd_phys::mhd_glm = .false.
 Whether GLM-MHD is used to control div B. More...
 
logical, public, protected mod_mhd_phys::mhd_glm_extended = .true.
 Whether extended GLM-MHD is used with additional sources. More...
 
logical, public, protected mod_mhd_phys::mhd_trac = .false.
 Whether TRAC method is used. More...
 
integer, public, protected mod_mhd_phys::mhd_trac_type =1
 Which TRAC method is used. More...
 
double precision, public, protected mod_mhd_phys::mhd_trac_mask = 0.d0
 Height of the mask used in the TRAC method. More...
 
integer, public, protected mod_mhd_phys::mhd_trac_finegrid =4
 Distance between two adjacent traced magnetic field lines (in finest cell size) More...
 
logical, public, protected mod_mhd_phys::mhd_internal_e = .false.
 Whether internal energy is solved instead of total energy. More...
 
logical, public, protected mod_mhd_phys::mhd_hydrodynamic_e = .false.
 Whether hydrodynamic energy is solved instead of total energy. More...
 
logical, public, protected mod_mhd_phys::source_split_divb = .false.
 Whether divB cleaning sources are added splitting from fluid solver. More...
 
double precision, public mod_mhd_phys::mhd_glm_alpha = 0.5d0
 GLM-MHD parameter: ratio of the diffusive and advective time scales for div b taking values within [0, 1]. More...
 
logical, public, protected mod_mhd_phys::mhd_semirelativistic = .false.
 Whether semirelativistic MHD equations (Gombosi 2002 JCP) are solved. More...
 
logical, public, protected mod_mhd_phys::mhd_boris_simplification = .false.
 Whether boris simplified semirelativistic MHD equations (Gombosi 2002 JCP) are solved. More...
 
double precision, public, protected mod_mhd_phys::mhd_reduced_c = 0.02d0*const_c
 Reduced speed of light for semirelativistic MHD: 2% of light speed. More...
 
logical, public, protected mod_mhd_phys::mhd_partial_ionization = .false.
 Whether plasma is partially ionized. More...
 
logical, public, protected mod_mhd_phys::mhd_cak_force = .false.
 Whether CAK radiation line force is activated. More...
 
logical, public, protected mod_mhd_phys::mhd_4th_order = .false.
 MHD fourth order. More...
 
logical, public mod_mhd_phys::has_equi_rho0 = .false.
 whether split off equilibrium density More...
 
logical, public mod_mhd_phys::has_equi_pe0 = .false.
 whether split off equilibrium thermal pressure More...
 
logical, public mod_mhd_phys::mhd_equi_thermal = .false.
 
integer, public mod_mhd_phys::equi_rho0_ = -1
 equi vars indices in the stateequi_vars array More...
 
integer, public mod_mhd_phys::equi_pe0_ = -1
 
logical, public, protected mod_mhd_phys::mhd_dump_full_vars = .false.
 whether dump full variables (when splitting is used) in a separate dat file More...
 
integer, public, protected mod_mhd_phys::mhd_n_tracer = 0
 Number of tracer species. More...
 
integer, public, protected mod_mhd_phys::rho_
 Index of the density (in the w array) More...
 
integer, dimension(:), allocatable, public, protected mod_mhd_phys::mom
 Indices of the momentum density. More...
 
integer, public, protected mod_mhd_phys::e_
 Index of the energy density (-1 if not present) More...
 
integer, public, protected mod_mhd_phys::p_
 Index of the gas pressure (-1 if not present) should equal e_. More...
 
integer, public, protected mod_mhd_phys::psi_
 Indices of the GLM psi. More...
 
integer, public, protected mod_mhd_phys::te_
 Indices of temperature. More...
 
integer, public, protected mod_mhd_phys::tcoff_
 Index of the cutoff temperature for the TRAC method. More...
 
integer, public, protected mod_mhd_phys::tweight_
 
integer, dimension(:), allocatable, public, protected mod_mhd_phys::tracer
 Indices of the tracers. More...
 
double precision, public mod_mhd_phys::mhd_gamma = 5.d0/3.0d0
 The adiabatic index. More...
 
double precision, public mod_mhd_phys::mhd_adiab = 1.0d0
 The adiabatic constant. More...
 
double precision, public mod_mhd_phys::mhd_eta = 0.0d0
 The MHD resistivity. More...
 
double precision, public mod_mhd_phys::mhd_eta_hyper = 0.0d0
 The MHD hyper-resistivity. More...
 
double precision, public mod_mhd_phys::mhd_etah = 0.0d0
 TODO: what is this? More...
 
double precision, public mod_mhd_phys::mhd_eta_ambi = 0.0d0
 The MHD ambipolar coefficient. More...
 
character(len=std_len), public, protected mod_mhd_phys::typedivbfix = 'linde'
 Method type to clean divergence of B. More...
 
character(len=std_len), public, protected mod_mhd_phys::type_ct = 'uct_contact'
 Method type of constrained transport. More...
 
logical, public, protected mod_mhd_phys::mhd_divb_4thorder = .false.
 Whether divB is computed with a fourth order approximation. More...
 
logical, public mod_mhd_phys::divbwave = .true.
 Add divB wave in Roe solver. More...
 
logical, public mod_mhd_phys::clean_initial_divb = .false.
 clean initial divB More...
 
double precision, public, protected mod_mhd_phys::he_abundance =0.1d0
 Helium abundance over Hydrogen. More...
 
double precision, public, protected mod_mhd_phys::h_ion_fr =1d0
 Ionization fraction of H H_ion_fr = H+/(H+ + H) More...
 
double precision, public, protected mod_mhd_phys::he_ion_fr =1d0
 Ionization fraction of He He_ion_fr = (He2+ + He+)/(He2+ + He+ + He) More...
 
double precision, public, protected mod_mhd_phys::he_ion_fr2 =1d0
 Ratio of number He2+ / number He+ + He2+ He_ion_fr2 = He2+/(He2+ + He+) More...
 
double precision, public, protected mod_mhd_phys::rr =1d0
 
logical, public, protected mod_mhd_phys::eq_state_units = .true.
 
logical, dimension(2 *^nd), public, protected mod_mhd_phys::boundary_divbfix =.true.
 To control divB=0 fix for boundary. More...
 
integer, dimension(2 *^nd), public, protected mod_mhd_phys::boundary_divbfix_skip =0
 To skip * layer of ghost cells during divB=0 fix for boundary. More...
 
logical, public, protected mod_mhd_phys::b0field_forcefree =.true.
 B0 field is force-free. More...
 
procedure(mask_subroutine), pointer, public mod_mhd_phys::usr_mask_ambipolar => null()
 
procedure(sub_convert), pointer, public mod_mhd_phys::mhd_to_primitive => null()
 
procedure(sub_convert), pointer, public mod_mhd_phys::mhd_to_conserved => null()
 
procedure(sub_get_pthermal), pointer, public mod_mhd_phys::mhd_get_pthermal => null()
 
procedure(sub_get_pthermal), pointer, public mod_mhd_phys::mhd_get_temperature => null()
 
procedure(sub_get_v), pointer, public mod_mhd_phys::mhd_get_v => null()
 
procedure(fun_kin_en), pointer, public mod_mhd_phys::mhd_kin_en => null()